Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Mir3081-201ENSMUST00000175305 84 ntBASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Gm7461-201ENSMUST00000058918 827 ntBASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Rnf43Q5NCP0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf43Q5NCP0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf43Q5NCP0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rnf43Q5NCP0 Actl10-202ENSMUST00000226583 1501 ntBASIC17.53■□□□□ 0.4
Rnf43Q5NCP0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf43Q5NCP0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf43Q5NCP0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.53■□□□□ 0.4
Rnf43Q5NCP0 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.53■□□□□ 0.4
Rnf43Q5NCP0 Gm27742-201ENSMUST00000184667 60 ntBASIC17.53■□□□□ 0.4
Rnf43Q5NCP0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf43Q5NCP0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf43Q5NCP0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf43Q5NCP0 Gm10566-201ENSMUST00000086739 996 ntBASIC17.53■□□□□ 0.4
Rnf43Q5NCP0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf43Q5NCP0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf43Q5NCP0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf43Q5NCP0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf43Q5NCP0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rnf43Q5NCP0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf43Q5NCP0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf43Q5NCP0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf43Q5NCP0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf43Q5NCP0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf43Q5NCP0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf43Q5NCP0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rnf43Q5NCP0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf43Q5NCP0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf43Q5NCP0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf43Q5NCP0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.52■□□□□ 0.4
Rnf43Q5NCP0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf43Q5NCP0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.52■□□□□ 0.4
Rnf43Q5NCP0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.52■□□□□ 0.4
Rnf43Q5NCP0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf43Q5NCP0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf43Q5NCP0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Rnf43Q5NCP0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf43Q5NCP0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf43Q5NCP0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf43Q5NCP0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf43Q5NCP0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
Rnf43Q5NCP0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Rnf43Q5NCP0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf43Q5NCP0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf43Q5NCP0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf43Q5NCP0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf43Q5NCP0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
Rnf43Q5NCP0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.51■□□□□ 0.39
Rnf43Q5NCP0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf43Q5NCP0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf43Q5NCP0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf43Q5NCP0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rnf43Q5NCP0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms