Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2bQ56A07 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2bQ56A07 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2bQ56A07 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2bQ56A07 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2bQ56A07 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2bQ56A07 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2bQ56A07 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Scn2bQ56A07 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.1■□□□□ 0.33
Scn2bQ56A07 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn2bQ56A07 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn2bQ56A07 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn2bQ56A07 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn2bQ56A07 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Scn2bQ56A07 Gm12527-201ENSMUST00000117967 564 ntBASIC17.1■□□□□ 0.33
Scn2bQ56A07 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.1■□□□□ 0.33
Scn2bQ56A07 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.1■□□□□ 0.33
Scn2bQ56A07 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Scn2bQ56A07 Gm20760-201ENSMUST00000179197 648 ntBASIC17.1■□□□□ 0.33
Scn2bQ56A07 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Scn2bQ56A07 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn2bQ56A07 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scn2bQ56A07 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scn2bQ56A07 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn2bQ56A07 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn2bQ56A07 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Scn2bQ56A07 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scn2bQ56A07 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Scn2bQ56A07 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scn2bQ56A07 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn2bQ56A07 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scn2bQ56A07 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.1■□□□□ 0.33
Scn2bQ56A07 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn2bQ56A07 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2bQ56A07 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2bQ56A07 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2bQ56A07 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.09■□□□□ 0.33
Scn2bQ56A07 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Scn2bQ56A07 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2bQ56A07 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2bQ56A07 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2bQ56A07 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2bQ56A07 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2bQ56A07 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2bQ56A07 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2bQ56A07 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2bQ56A07 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Scn2bQ56A07 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2bQ56A07 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2bQ56A07 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.09■□□□□ 0.33
Scn2bQ56A07 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2bQ56A07 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2bQ56A07 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2bQ56A07 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2bQ56A07 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Scn2bQ56A07 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Scn2bQ56A07 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn2bQ56A07 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Scn2bQ56A07 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.08■□□□□ 0.33
Scn2bQ56A07 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.08■□□□□ 0.33
Scn2bQ56A07 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn2bQ56A07 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn2bQ56A07 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn2bQ56A07 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn2bQ56A07 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scn2bQ56A07 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn2bQ56A07 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn2bQ56A07 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Scn2bQ56A07 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Scn2bQ56A07 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scn2bQ56A07 Gm27011-201ENSMUST00000182352 972 ntBASIC17.08■□□□□ 0.32
Scn2bQ56A07 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scn2bQ56A07 Trmt13-210ENSMUST00000198454 880 ntBASIC17.08■□□□□ 0.32
Scn2bQ56A07 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scn2bQ56A07 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.08■□□□□ 0.32
Scn2bQ56A07 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn2bQ56A07 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn2bQ56A07 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn2bQ56A07 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn2bQ56A07 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scn2bQ56A07 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.08■□□□□ 0.32
Scn2bQ56A07 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn2bQ56A07 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn2bQ56A07 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn2bQ56A07 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Scn2bQ56A07 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.07■□□□□ 0.32
Scn2bQ56A07 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Scn2bQ56A07 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn2bQ56A07 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn2bQ56A07 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Scn2bQ56A07 Gm10653-202ENSMUST00000139570 835 ntBASIC17.07■□□□□ 0.32
Scn2bQ56A07 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Scn2bQ56A07 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn2bQ56A07 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn2bQ56A07 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn2bQ56A07 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.07■□□□□ 0.32
Scn2bQ56A07 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn2bQ56A07 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn2bQ56A07 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn2bQ56A07 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 108.7 ms