Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Srrm1Q52KI8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Srrm1Q52KI8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Srrm1Q52KI8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Srrm1Q52KI8 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Srrm1Q52KI8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Srrm1Q52KI8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Srrm1Q52KI8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Srrm1Q52KI8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Srrm1Q52KI8 Gm10418-201ENSMUST00000100943 576 ntBASIC19.33■□□□□ 0.68
Srrm1Q52KI8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Srrm1Q52KI8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.33■□□□□ 0.68
Srrm1Q52KI8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Srrm1Q52KI8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Srrm1Q52KI8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Srrm1Q52KI8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Srrm1Q52KI8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Srrm1Q52KI8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Srrm1Q52KI8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.33■□□□□ 0.68
Srrm1Q52KI8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Srrm1Q52KI8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.33■□□□□ 0.68
Srrm1Q52KI8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.33■□□□□ 0.68
Srrm1Q52KI8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Srrm1Q52KI8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Srrm1Q52KI8 Tgds-204ENSMUST00000228543 1594 ntBASIC19.32■□□□□ 0.68
Srrm1Q52KI8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Srrm1Q52KI8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Srrm1Q52KI8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Srrm1Q52KI8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Srrm1Q52KI8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Srrm1Q52KI8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Srrm1Q52KI8 Gm11452-201ENSMUST00000122376 690 ntBASIC19.32■□□□□ 0.68
Srrm1Q52KI8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Srrm1Q52KI8 Gm45328-201ENSMUST00000210942 917 ntBASIC19.32■□□□□ 0.68
Srrm1Q52KI8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Srrm1Q52KI8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Srrm1Q52KI8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Srrm1Q52KI8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Srrm1Q52KI8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Srrm1Q52KI8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Srrm1Q52KI8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Srrm1Q52KI8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Srrm1Q52KI8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Srrm1Q52KI8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Srrm1Q52KI8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Srrm1Q52KI8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Srrm1Q52KI8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Srrm1Q52KI8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Srrm1Q52KI8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Srrm1Q52KI8 Gm27459-201ENSMUST00000184860 107 ntBASIC19.31■□□□□ 0.68
Srrm1Q52KI8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Srrm1Q52KI8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Srrm1Q52KI8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Srrm1Q52KI8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Srrm1Q52KI8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Srrm1Q52KI8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Srrm1Q52KI8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Srrm1Q52KI8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Srrm1Q52KI8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Srrm1Q52KI8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Srrm1Q52KI8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Srrm1Q52KI8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Srrm1Q52KI8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Srrm1Q52KI8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Srrm1Q52KI8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Srrm1Q52KI8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Srrm1Q52KI8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Srrm1Q52KI8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.3■□□□□ 0.68
Srrm1Q52KI8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Srrm1Q52KI8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Srrm1Q52KI8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Srrm1Q52KI8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Srrm1Q52KI8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.3■□□□□ 0.68
Srrm1Q52KI8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Srrm1Q52KI8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Srrm1Q52KI8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Srrm1Q52KI8 BC021767-201ENSMUST00000126387 1716 ntBASIC19.29■□□□□ 0.68
Srrm1Q52KI8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Srrm1Q52KI8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Srrm1Q52KI8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Srrm1Q52KI8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.29■□□□□ 0.68
Srrm1Q52KI8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Srrm1Q52KI8 Mir8098-201ENSMUST00000184011 137 ntBASIC19.29■□□□□ 0.68
Srrm1Q52KI8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.29■□□□□ 0.68
Srrm1Q52KI8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Srrm1Q52KI8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Srrm1Q52KI8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Srrm1Q52KI8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Srrm1Q52KI8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Srrm1Q52KI8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Srrm1Q52KI8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Srrm1Q52KI8 Gm15794-201ENSMUST00000120182 631 ntBASIC19.28■□□□□ 0.68
Srrm1Q52KI8 Gm43347-201ENSMUST00000200226 580 ntBASIC19.28■□□□□ 0.68
Srrm1Q52KI8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.28■□□□□ 0.68
Srrm1Q52KI8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Srrm1Q52KI8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Srrm1Q52KI8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Srrm1Q52KI8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.28■□□□□ 0.68
Srrm1Q52KI8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Srrm1Q52KI8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms