Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rc3h1Q4VGL6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rc3h1Q4VGL6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rc3h1Q4VGL6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rc3h1Q4VGL6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rc3h1Q4VGL6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rc3h1Q4VGL6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rc3h1Q4VGL6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.94■□□□□ 0.78
Rc3h1Q4VGL6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rc3h1Q4VGL6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rc3h1Q4VGL6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.94■□□□□ 0.78
Rc3h1Q4VGL6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.94■□□□□ 0.78
Rc3h1Q4VGL6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.94■□□□□ 0.78
Rc3h1Q4VGL6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rc3h1Q4VGL6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rc3h1Q4VGL6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rc3h1Q4VGL6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rc3h1Q4VGL6 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.93■□□□□ 0.78
Rc3h1Q4VGL6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rc3h1Q4VGL6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rc3h1Q4VGL6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rc3h1Q4VGL6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rc3h1Q4VGL6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rc3h1Q4VGL6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rc3h1Q4VGL6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Rc3h1Q4VGL6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rc3h1Q4VGL6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rc3h1Q4VGL6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Rc3h1Q4VGL6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rc3h1Q4VGL6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Rc3h1Q4VGL6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rc3h1Q4VGL6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rc3h1Q4VGL6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rc3h1Q4VGL6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rc3h1Q4VGL6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rc3h1Q4VGL6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rc3h1Q4VGL6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rc3h1Q4VGL6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rc3h1Q4VGL6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rc3h1Q4VGL6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.92■□□□□ 0.78
Rc3h1Q4VGL6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rc3h1Q4VGL6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.92■□□□□ 0.78
Rc3h1Q4VGL6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Rc3h1Q4VGL6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rc3h1Q4VGL6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rc3h1Q4VGL6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rc3h1Q4VGL6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h1Q4VGL6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h1Q4VGL6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h1Q4VGL6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h1Q4VGL6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h1Q4VGL6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Rc3h1Q4VGL6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h1Q4VGL6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h1Q4VGL6 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.91■□□□□ 0.78
Rc3h1Q4VGL6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.91■□□□□ 0.78
Rc3h1Q4VGL6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h1Q4VGL6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h1Q4VGL6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h1Q4VGL6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Rc3h1Q4VGL6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h1Q4VGL6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Rc3h1Q4VGL6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h1Q4VGL6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h1Q4VGL6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h1Q4VGL6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h1Q4VGL6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h1Q4VGL6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h1Q4VGL6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h1Q4VGL6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.9■□□□□ 0.78
Rc3h1Q4VGL6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h1Q4VGL6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h1Q4VGL6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rc3h1Q4VGL6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h1Q4VGL6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Rc3h1Q4VGL6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h1Q4VGL6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rc3h1Q4VGL6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h1Q4VGL6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.9■□□□□ 0.78
Rc3h1Q4VGL6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h1Q4VGL6 Gm21362-201ENSMUST00000194272 928 ntBASIC19.9■□□□□ 0.78
Rc3h1Q4VGL6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rc3h1Q4VGL6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h1Q4VGL6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h1Q4VGL6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h1Q4VGL6 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.9■□□□□ 0.78
Rc3h1Q4VGL6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h1Q4VGL6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.89■□□□□ 0.77
Rc3h1Q4VGL6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.89■□□□□ 0.77
Rc3h1Q4VGL6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rc3h1Q4VGL6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rc3h1Q4VGL6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rc3h1Q4VGL6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Rc3h1Q4VGL6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rc3h1Q4VGL6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rc3h1Q4VGL6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rc3h1Q4VGL6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rc3h1Q4VGL6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rc3h1Q4VGL6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rc3h1Q4VGL6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms