Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3hdm4Q4VBF2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
R3hdm4Q4VBF2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3hdm4Q4VBF2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
R3hdm4Q4VBF2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
R3hdm4Q4VBF2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
R3hdm4Q4VBF2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm4Q4VBF2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
R3hdm4Q4VBF2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm4Q4VBF2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.6■□□□□ 0.57
R3hdm4Q4VBF2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm4Q4VBF2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm4Q4VBF2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm4Q4VBF2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
R3hdm4Q4VBF2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm4Q4VBF2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
R3hdm4Q4VBF2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm4Q4VBF2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm4Q4VBF2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.6■□□□□ 0.57
R3hdm4Q4VBF2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
R3hdm4Q4VBF2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.6■□□□□ 0.57
R3hdm4Q4VBF2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3hdm4Q4VBF2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 Gm27463-201ENSMUST00000183569 57 ntBASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 Il3ra-202ENSMUST00000223589 738 ntBASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
R3hdm4Q4VBF2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
R3hdm4Q4VBF2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
R3hdm4Q4VBF2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
R3hdm4Q4VBF2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
R3hdm4Q4VBF2 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.58■□□□□ 0.56
R3hdm4Q4VBF2 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.58■□□□□ 0.56
R3hdm4Q4VBF2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
R3hdm4Q4VBF2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
R3hdm4Q4VBF2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
R3hdm4Q4VBF2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3hdm4Q4VBF2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3hdm4Q4VBF2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
R3hdm4Q4VBF2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3hdm4Q4VBF2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
R3hdm4Q4VBF2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.58■□□□□ 0.56
R3hdm4Q4VBF2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3hdm4Q4VBF2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm4Q4VBF2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.57■□□□□ 0.56
R3hdm4Q4VBF2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
R3hdm4Q4VBF2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm4Q4VBF2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm4Q4VBF2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm4Q4VBF2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm4Q4VBF2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
R3hdm4Q4VBF2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.57■□□□□ 0.56
R3hdm4Q4VBF2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
R3hdm4Q4VBF2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm4Q4VBF2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm4Q4VBF2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm4Q4VBF2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm4Q4VBF2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm4Q4VBF2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm4Q4VBF2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
R3hdm4Q4VBF2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3hdm4Q4VBF2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms