Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
Pds5bQ4VA53 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Pds5bQ4VA53 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Pds5bQ4VA53 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Pds5bQ4VA53 Gm43272-201ENSMUST00000200599 1584 ntBASIC30.18■■■□□ 2.42
Pds5bQ4VA53 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
Pds5bQ4VA53 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Pds5bQ4VA53 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC30.18■■■□□ 2.42
Pds5bQ4VA53 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Pds5bQ4VA53 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Pds5bQ4VA53 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
Pds5bQ4VA53 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Pds5bQ4VA53 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Pds5bQ4VA53 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Pds5bQ4VA53 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Pds5bQ4VA53 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC30.16■■■□□ 2.42
Pds5bQ4VA53 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Pds5bQ4VA53 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Pds5bQ4VA53 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC30.16■■■□□ 2.42
Pds5bQ4VA53 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Pds5bQ4VA53 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC30.16■■■□□ 2.42
Pds5bQ4VA53 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Pds5bQ4VA53 Gm42922-201ENSMUST00000195887 2078 ntBASIC30.16■■■□□ 2.42
Pds5bQ4VA53 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Pds5bQ4VA53 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Pds5bQ4VA53 Ndufaf2-202ENSMUST00000223734 556 ntBASIC30.15■■■□□ 2.42
Pds5bQ4VA53 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
Pds5bQ4VA53 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Pds5bQ4VA53 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC30.15■■■□□ 2.42
Pds5bQ4VA53 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Pds5bQ4VA53 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
Pds5bQ4VA53 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Pds5bQ4VA53 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC30.15■■■□□ 2.42
Pds5bQ4VA53 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC30.15■■■□□ 2.42
Pds5bQ4VA53 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
Pds5bQ4VA53 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Pds5bQ4VA53 Gm18421-201ENSMUST00000204122 625 ntBASIC30.14■■■□□ 2.42
Pds5bQ4VA53 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC30.14■■■□□ 2.42
Pds5bQ4VA53 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC30.14■■■□□ 2.42
Pds5bQ4VA53 AC090659.1-201ENSMUST00000224334 768 ntBASIC30.14■■■□□ 2.42
Pds5bQ4VA53 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.42
Pds5bQ4VA53 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Pds5bQ4VA53 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Pds5bQ4VA53 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Pds5bQ4VA53 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.42
Pds5bQ4VA53 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC30.14■■■□□ 2.41
Pds5bQ4VA53 AC084391.1-201ENSMUST00000200651 141 ntBASIC30.13■■■□□ 2.41
Pds5bQ4VA53 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Pds5bQ4VA53 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC30.13■■■□□ 2.41
Pds5bQ4VA53 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC30.13■■■□□ 2.41
Pds5bQ4VA53 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Pds5bQ4VA53 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Pds5bQ4VA53 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC30.13■■■□□ 2.41
Pds5bQ4VA53 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC30.13■■■□□ 2.41
Pds5bQ4VA53 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Pds5bQ4VA53 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Pds5bQ4VA53 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Pds5bQ4VA53 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Pds5bQ4VA53 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Pds5bQ4VA53 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC30.12■■■□□ 2.41
Pds5bQ4VA53 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Pds5bQ4VA53 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Pds5bQ4VA53 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
Pds5bQ4VA53 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Pds5bQ4VA53 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Pds5bQ4VA53 Gm13036-201ENSMUST00000117799 748 ntBASIC30.11■■■□□ 2.41
Pds5bQ4VA53 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC30.11■■■□□ 2.41
Pds5bQ4VA53 Gm6550-201ENSMUST00000187574 993 ntBASIC30.11■■■□□ 2.41
Pds5bQ4VA53 Chchd1-203ENSMUST00000224633 557 ntBASIC30.11■■■□□ 2.41
Pds5bQ4VA53 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Pds5bQ4VA53 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Pds5bQ4VA53 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Pds5bQ4VA53 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Pds5bQ4VA53 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Pds5bQ4VA53 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Pds5bQ4VA53 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC30.1■■■□□ 2.41
Pds5bQ4VA53 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC30.1■■■□□ 2.41
Pds5bQ4VA53 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Pds5bQ4VA53 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Pds5bQ4VA53 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Pds5bQ4VA53 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC30.09■■■□□ 2.41
Pds5bQ4VA53 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
Pds5bQ4VA53 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Pds5bQ4VA53 Gm27628-201ENSMUST00000184911 107 ntBASIC30.09■■■□□ 2.41
Pds5bQ4VA53 Gm6089-201ENSMUST00000197666 938 ntBASIC30.09■■■□□ 2.41
Pds5bQ4VA53 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Pds5bQ4VA53 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Pds5bQ4VA53 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Pds5bQ4VA53 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC30.08■■■□□ 2.41
Pds5bQ4VA53 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC30.08■■■□□ 2.41
Pds5bQ4VA53 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Pds5bQ4VA53 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC30.08■■■□□ 2.41
Pds5bQ4VA53 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Pds5bQ4VA53 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC30.08■■■□□ 2.41
Pds5bQ4VA53 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
Pds5bQ4VA53 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Pds5bQ4VA53 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Pds5bQ4VA53 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC30.07■■■□□ 2.4
Pds5bQ4VA53 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Pds5bQ4VA53 Gm5648-201ENSMUST00000122244 1587 ntBASIC30.07■■■□□ 2.4
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms