Protein–RNA interactions for Protein: Q3V2L0

Defb28, Beta-defensin, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb28Q3V2L0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Defb28Q3V2L0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Defb28Q3V2L0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.59■□□□□ 0.25
Defb28Q3V2L0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Defb28Q3V2L0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.59■□□□□ 0.25
Defb28Q3V2L0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.59■□□□□ 0.25
Defb28Q3V2L0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Defb28Q3V2L0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Defb28Q3V2L0 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.59■□□□□ 0.25
Defb28Q3V2L0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.59■□□□□ 0.25
Defb28Q3V2L0 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.59■□□□□ 0.25
Defb28Q3V2L0 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.59■□□□□ 0.25
Defb28Q3V2L0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Defb28Q3V2L0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Defb28Q3V2L0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.59■□□□□ 0.25
Defb28Q3V2L0 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.59■□□□□ 0.25
Defb28Q3V2L0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Defb28Q3V2L0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Defb28Q3V2L0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.59■□□□□ 0.25
Defb28Q3V2L0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Defb28Q3V2L0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Defb28Q3V2L0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Defb28Q3V2L0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Defb28Q3V2L0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Defb28Q3V2L0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.58■□□□□ 0.24
Defb28Q3V2L0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.58■□□□□ 0.24
Defb28Q3V2L0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Defb28Q3V2L0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.58■□□□□ 0.24
Defb28Q3V2L0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Defb28Q3V2L0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Defb28Q3V2L0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Defb28Q3V2L0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Defb28Q3V2L0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Defb28Q3V2L0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Defb28Q3V2L0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.58■□□□□ 0.24
Defb28Q3V2L0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Defb28Q3V2L0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Defb28Q3V2L0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Defb28Q3V2L0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Defb28Q3V2L0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Defb28Q3V2L0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Defb28Q3V2L0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Defb28Q3V2L0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Defb28Q3V2L0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Defb28Q3V2L0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.57■□□□□ 0.24
Defb28Q3V2L0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Defb28Q3V2L0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Defb28Q3V2L0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Defb28Q3V2L0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Defb28Q3V2L0 Gm1401-201ENSMUST00000122048 772 ntBASIC16.57■□□□□ 0.24
Defb28Q3V2L0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Defb28Q3V2L0 Gm2213-201ENSMUST00000197485 688 ntBASIC16.57■□□□□ 0.24
Defb28Q3V2L0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Defb28Q3V2L0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Defb28Q3V2L0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Defb28Q3V2L0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Defb28Q3V2L0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Defb28Q3V2L0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Defb28Q3V2L0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Defb28Q3V2L0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.56■□□□□ 0.24
Defb28Q3V2L0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.56■□□□□ 0.24
Defb28Q3V2L0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Defb28Q3V2L0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Defb28Q3V2L0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Defb28Q3V2L0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Defb28Q3V2L0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Defb28Q3V2L0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Defb28Q3V2L0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Defb28Q3V2L0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Defb28Q3V2L0 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.56■□□□□ 0.24
Defb28Q3V2L0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Defb28Q3V2L0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Defb28Q3V2L0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Defb28Q3V2L0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.56■□□□□ 0.24
Defb28Q3V2L0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Defb28Q3V2L0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Defb28Q3V2L0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.55■□□□□ 0.24
Defb28Q3V2L0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Defb28Q3V2L0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Defb28Q3V2L0 Gm11594-201ENSMUST00000122313 162 ntBASIC16.55■□□□□ 0.24
Defb28Q3V2L0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.55■□□□□ 0.24
Defb28Q3V2L0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Defb28Q3V2L0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.55■□□□□ 0.24
Defb28Q3V2L0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Defb28Q3V2L0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Defb28Q3V2L0 Gm6376-201ENSMUST00000209407 580 ntBASIC16.55■□□□□ 0.24
Defb28Q3V2L0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.55■□□□□ 0.24
Defb28Q3V2L0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Defb28Q3V2L0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Defb28Q3V2L0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Defb28Q3V2L0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Defb28Q3V2L0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Defb28Q3V2L0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Defb28Q3V2L0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Defb28Q3V2L0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Defb28Q3V2L0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.54■□□□□ 0.24
Defb28Q3V2L0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Defb28Q3V2L0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Defb28Q3V2L0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Defb28Q3V2L0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms