Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BC051142Q3V0M8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BC051142Q3V0M8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BC051142Q3V0M8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
BC051142Q3V0M8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
BC051142Q3V0M8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.47■□□□□ 0.55
BC051142Q3V0M8 Gm12382-201ENSMUST00000122005 922 ntBASIC18.47■□□□□ 0.55
BC051142Q3V0M8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BC051142Q3V0M8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BC051142Q3V0M8 Gm10698-201ENSMUST00000182663 604 ntBASIC18.47■□□□□ 0.55
BC051142Q3V0M8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
BC051142Q3V0M8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BC051142Q3V0M8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BC051142Q3V0M8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BC051142Q3V0M8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BC051142Q3V0M8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BC051142Q3V0M8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BC051142Q3V0M8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BC051142Q3V0M8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
BC051142Q3V0M8 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.46■□□□□ 0.55
BC051142Q3V0M8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.46■□□□□ 0.55
BC051142Q3V0M8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.46■□□□□ 0.55
BC051142Q3V0M8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BC051142Q3V0M8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BC051142Q3V0M8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BC051142Q3V0M8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BC051142Q3V0M8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BC051142Q3V0M8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BC051142Q3V0M8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
BC051142Q3V0M8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
BC051142Q3V0M8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.45■□□□□ 0.54
BC051142Q3V0M8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BC051142Q3V0M8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BC051142Q3V0M8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
BC051142Q3V0M8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.45■□□□□ 0.54
BC051142Q3V0M8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BC051142Q3V0M8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
BC051142Q3V0M8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BC051142Q3V0M8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
BC051142Q3V0M8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BC051142Q3V0M8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.45■□□□□ 0.54
BC051142Q3V0M8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BC051142Q3V0M8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BC051142Q3V0M8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BC051142Q3V0M8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BC051142Q3V0M8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
BC051142Q3V0M8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BC051142Q3V0M8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BC051142Q3V0M8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.44■□□□□ 0.54
BC051142Q3V0M8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BC051142Q3V0M8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
BC051142Q3V0M8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
BC051142Q3V0M8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.44■□□□□ 0.54
BC051142Q3V0M8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
BC051142Q3V0M8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BC051142Q3V0M8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
BC051142Q3V0M8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
BC051142Q3V0M8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
BC051142Q3V0M8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.44■□□□□ 0.54
BC051142Q3V0M8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
BC051142Q3V0M8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BC051142Q3V0M8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BC051142Q3V0M8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BC051142Q3V0M8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
BC051142Q3V0M8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BC051142Q3V0M8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BC051142Q3V0M8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
BC051142Q3V0M8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
BC051142Q3V0M8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BC051142Q3V0M8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BC051142Q3V0M8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BC051142Q3V0M8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
BC051142Q3V0M8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BC051142Q3V0M8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.43■□□□□ 0.54
BC051142Q3V0M8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
BC051142Q3V0M8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BC051142Q3V0M8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BC051142Q3V0M8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
BC051142Q3V0M8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
BC051142Q3V0M8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
BC051142Q3V0M8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BC051142Q3V0M8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BC051142Q3V0M8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
BC051142Q3V0M8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
BC051142Q3V0M8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BC051142Q3V0M8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BC051142Q3V0M8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
BC051142Q3V0M8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BC051142Q3V0M8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.42■□□□□ 0.54
BC051142Q3V0M8 Gm10517-202ENSMUST00000192970 758 ntBASIC18.42■□□□□ 0.54
BC051142Q3V0M8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BC051142Q3V0M8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BC051142Q3V0M8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BC051142Q3V0M8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.42■□□□□ 0.54
BC051142Q3V0M8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
BC051142Q3V0M8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BC051142Q3V0M8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BC051142Q3V0M8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.41■□□□□ 0.54
BC051142Q3V0M8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
BC051142Q3V0M8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms