Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim80Q3V061 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trim80Q3V061 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trim80Q3V061 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim80Q3V061 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim80Q3V061 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim80Q3V061 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim80Q3V061 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim80Q3V061 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.84■□□□□ 0.45
Trim80Q3V061 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.84■□□□□ 0.45
Trim80Q3V061 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim80Q3V061 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.84■□□□□ 0.45
Trim80Q3V061 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim80Q3V061 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim80Q3V061 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.83■□□□□ 0.45
Trim80Q3V061 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim80Q3V061 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim80Q3V061 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim80Q3V061 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim80Q3V061 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim80Q3V061 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim80Q3V061 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim80Q3V061 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim80Q3V061 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.83■□□□□ 0.44
Trim80Q3V061 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trim80Q3V061 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.83■□□□□ 0.44
Trim80Q3V061 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.83■□□□□ 0.44
Trim80Q3V061 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.83■□□□□ 0.44
Trim80Q3V061 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim80Q3V061 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim80Q3V061 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Trim80Q3V061 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim80Q3V061 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.83■□□□□ 0.44
Trim80Q3V061 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim80Q3V061 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim80Q3V061 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
Trim80Q3V061 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.83■□□□□ 0.44
Trim80Q3V061 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.83■□□□□ 0.44
Trim80Q3V061 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim80Q3V061 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim80Q3V061 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim80Q3V061 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim80Q3V061 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.82■□□□□ 0.44
Trim80Q3V061 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim80Q3V061 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim80Q3V061 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim80Q3V061 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim80Q3V061 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim80Q3V061 Gm10812-201ENSMUST00000099864 546 ntBASIC17.82■□□□□ 0.44
Trim80Q3V061 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim80Q3V061 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trim80Q3V061 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim80Q3V061 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim80Q3V061 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim80Q3V061 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim80Q3V061 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim80Q3V061 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.81■□□□□ 0.44
Trim80Q3V061 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim80Q3V061 Dancr-204ENSMUST00000132389 2347 ntBASIC17.81■□□□□ 0.44
Trim80Q3V061 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.81■□□□□ 0.44
Trim80Q3V061 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim80Q3V061 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim80Q3V061 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.81■□□□□ 0.44
Trim80Q3V061 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trim80Q3V061 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim80Q3V061 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim80Q3V061 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim80Q3V061 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim80Q3V061 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim80Q3V061 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim80Q3V061 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim80Q3V061 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim80Q3V061 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim80Q3V061 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim80Q3V061 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim80Q3V061 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Trim80Q3V061 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim80Q3V061 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim80Q3V061 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim80Q3V061 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim80Q3V061 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim80Q3V061 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim80Q3V061 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim80Q3V061 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim80Q3V061 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trim80Q3V061 Gm37856-201ENSMUST00000191634 999 ntBASIC17.8■□□□□ 0.44
Trim80Q3V061 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim80Q3V061 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trim80Q3V061 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trim80Q3V061 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim80Q3V061 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim80Q3V061 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim80Q3V061 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim80Q3V061 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim80Q3V061 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim80Q3V061 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim80Q3V061 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim80Q3V061 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim80Q3V061 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Trim80Q3V061 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms