Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnga4Q3UW12 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnga4Q3UW12 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnga4Q3UW12 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.57■□□□□ 0.4
Cnga4Q3UW12 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cnga4Q3UW12 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnga4Q3UW12 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cnga4Q3UW12 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.57■□□□□ 0.4
Cnga4Q3UW12 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cnga4Q3UW12 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnga4Q3UW12 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnga4Q3UW12 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnga4Q3UW12 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Cnga4Q3UW12 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cnga4Q3UW12 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnga4Q3UW12 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnga4Q3UW12 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.56■□□□□ 0.4
Cnga4Q3UW12 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.56■□□□□ 0.4
Cnga4Q3UW12 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnga4Q3UW12 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnga4Q3UW12 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cnga4Q3UW12 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.56■□□□□ 0.4
Cnga4Q3UW12 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cnga4Q3UW12 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cnga4Q3UW12 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cnga4Q3UW12 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnga4Q3UW12 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.56■□□□□ 0.4
Cnga4Q3UW12 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnga4Q3UW12 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cnga4Q3UW12 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnga4Q3UW12 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnga4Q3UW12 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cnga4Q3UW12 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Cnga4Q3UW12 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnga4Q3UW12 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnga4Q3UW12 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnga4Q3UW12 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
Cnga4Q3UW12 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnga4Q3UW12 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cnga4Q3UW12 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.55■□□□□ 0.4
Cnga4Q3UW12 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cnga4Q3UW12 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.55■□□□□ 0.4
Cnga4Q3UW12 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnga4Q3UW12 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.55■□□□□ 0.4
Cnga4Q3UW12 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cnga4Q3UW12 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.54■□□□□ 0.4
Cnga4Q3UW12 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.54■□□□□ 0.4
Cnga4Q3UW12 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cnga4Q3UW12 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cnga4Q3UW12 Gm10418-201ENSMUST00000100943 576 ntBASIC17.54■□□□□ 0.4
Cnga4Q3UW12 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cnga4Q3UW12 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cnga4Q3UW12 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cnga4Q3UW12 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cnga4Q3UW12 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cnga4Q3UW12 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cnga4Q3UW12 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cnga4Q3UW12 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cnga4Q3UW12 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cnga4Q3UW12 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cnga4Q3UW12 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnga4Q3UW12 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnga4Q3UW12 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.53■□□□□ 0.4
Cnga4Q3UW12 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnga4Q3UW12 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnga4Q3UW12 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cnga4Q3UW12 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnga4Q3UW12 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cnga4Q3UW12 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnga4Q3UW12 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.53■□□□□ 0.4
Cnga4Q3UW12 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnga4Q3UW12 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnga4Q3UW12 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnga4Q3UW12 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cnga4Q3UW12 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnga4Q3UW12 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnga4Q3UW12 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnga4Q3UW12 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnga4Q3UW12 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnga4Q3UW12 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cnga4Q3UW12 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cnga4Q3UW12 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cnga4Q3UW12 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cnga4Q3UW12 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.52■□□□□ 0.4
Cnga4Q3UW12 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cnga4Q3UW12 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cnga4Q3UW12 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cnga4Q3UW12 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.52■□□□□ 0.4
Cnga4Q3UW12 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Cnga4Q3UW12 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cnga4Q3UW12 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cnga4Q3UW12 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cnga4Q3UW12 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.52■□□□□ 0.39
Cnga4Q3UW12 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cnga4Q3UW12 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnga4Q3UW12 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnga4Q3UW12 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.51■□□□□ 0.39
Cnga4Q3UW12 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnga4Q3UW12 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnga4Q3UW12 Gm15039-201ENSMUST00000118914 875 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms