Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zfp560Q3URI6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zfp560Q3URI6 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zfp560Q3URI6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zfp560Q3URI6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Zfp560Q3URI6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Zfp560Q3URI6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp560Q3URI6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Zfp560Q3URI6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp560Q3URI6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp560Q3URI6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp560Q3URI6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.3■□□□□ 0.36
Zfp560Q3URI6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.3■□□□□ 0.36
Zfp560Q3URI6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp560Q3URI6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp560Q3URI6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.3■□□□□ 0.36
Zfp560Q3URI6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.3■□□□□ 0.36
Zfp560Q3URI6 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.3■□□□□ 0.36
Zfp560Q3URI6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.3■□□□□ 0.36
Zfp560Q3URI6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp560Q3URI6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.3■□□□□ 0.36
Zfp560Q3URI6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp560Q3URI6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp560Q3URI6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp560Q3URI6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Zfp560Q3URI6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp560Q3URI6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.3■□□□□ 0.36
Zfp560Q3URI6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp560Q3URI6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.29■□□□□ 0.36
Zfp560Q3URI6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.29■□□□□ 0.36
Zfp560Q3URI6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Zfp560Q3URI6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Zfp560Q3URI6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp560Q3URI6 Odf3b-204ENSMUST00000227834 930 ntBASIC17.29■□□□□ 0.36
Zfp560Q3URI6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp560Q3URI6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp560Q3URI6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp560Q3URI6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp560Q3URI6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.28■□□□□ 0.36
Zfp560Q3URI6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp560Q3URI6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp560Q3URI6 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp560Q3URI6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Zfp560Q3URI6 Gm38027-201ENSMUST00000192315 235 ntBASIC17.28■□□□□ 0.36
Zfp560Q3URI6 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.28■□□□□ 0.36
Zfp560Q3URI6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp560Q3URI6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Zfp560Q3URI6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp560Q3URI6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp560Q3URI6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp560Q3URI6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Zfp560Q3URI6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp560Q3URI6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp560Q3URI6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp560Q3URI6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp560Q3URI6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp560Q3URI6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp560Q3URI6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp560Q3URI6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zfp560Q3URI6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zfp560Q3URI6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zfp560Q3URI6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.27■□□□□ 0.36
Zfp560Q3URI6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zfp560Q3URI6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Zfp560Q3URI6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Zfp560Q3URI6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Zfp560Q3URI6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Zfp560Q3URI6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Zfp560Q3URI6 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Zfp560Q3URI6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Zfp560Q3URI6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Zfp560Q3URI6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp560Q3URI6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp560Q3URI6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp560Q3URI6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp560Q3URI6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp560Q3URI6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp560Q3URI6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp560Q3URI6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp560Q3URI6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp560Q3URI6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp560Q3URI6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp560Q3URI6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.26■□□□□ 0.35
Zfp560Q3URI6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp560Q3URI6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Zfp560Q3URI6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp560Q3URI6 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.26■□□□□ 0.35
Zfp560Q3URI6 Gm21814-202ENSMUST00000203277 873 ntBASIC17.26■□□□□ 0.35
Zfp560Q3URI6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp560Q3URI6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp560Q3URI6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp560Q3URI6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp560Q3URI6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp560Q3URI6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.26■□□□□ 0.35
Zfp560Q3URI6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.25■□□□□ 0.35
Zfp560Q3URI6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms