Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp25Q3U435 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Mmp25Q3U435 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp25Q3U435 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp25Q3U435 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp25Q3U435 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp25Q3U435 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp25Q3U435 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.24■□□□□ 0.19
Mmp25Q3U435 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Mmp25Q3U435 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp25Q3U435 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Mmp25Q3U435 Gm13559-201ENSMUST00000120476 863 ntBASIC16.24■□□□□ 0.19
Mmp25Q3U435 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Mmp25Q3U435 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.24■□□□□ 0.19
Mmp25Q3U435 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp25Q3U435 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp25Q3U435 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp25Q3U435 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp25Q3U435 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.24■□□□□ 0.19
Mmp25Q3U435 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.24■□□□□ 0.19
Mmp25Q3U435 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp25Q3U435 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp25Q3U435 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp25Q3U435 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Mmp25Q3U435 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp25Q3U435 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp25Q3U435 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp25Q3U435 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Mmp25Q3U435 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Mmp25Q3U435 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Mmp25Q3U435 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.23■□□□□ 0.19
Mmp25Q3U435 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.23■□□□□ 0.19
Mmp25Q3U435 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp25Q3U435 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp25Q3U435 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Mmp25Q3U435 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.23■□□□□ 0.19
Mmp25Q3U435 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp25Q3U435 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp25Q3U435 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp25Q3U435 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp25Q3U435 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Mmp25Q3U435 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Mmp25Q3U435 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp25Q3U435 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.22■□□□□ 0.19
Mmp25Q3U435 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.22■□□□□ 0.19
Mmp25Q3U435 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.22■□□□□ 0.19
Mmp25Q3U435 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.22■□□□□ 0.19
Mmp25Q3U435 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp25Q3U435 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp25Q3U435 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp25Q3U435 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp25Q3U435 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp25Q3U435 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp25Q3U435 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.21■□□□□ 0.19
Mmp25Q3U435 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Mmp25Q3U435 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.21■□□□□ 0.19
Mmp25Q3U435 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp25Q3U435 Gm6433-201ENSMUST00000118634 875 ntBASIC16.21■□□□□ 0.19
Mmp25Q3U435 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.21■□□□□ 0.19
Mmp25Q3U435 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Mmp25Q3U435 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp25Q3U435 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Mmp25Q3U435 Mir7071-201ENSMUST00000184847 69 ntBASIC16.21■□□□□ 0.19
Mmp25Q3U435 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp25Q3U435 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp25Q3U435 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp25Q3U435 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp25Q3U435 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Mmp25Q3U435 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.21■□□□□ 0.18
Mmp25Q3U435 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Mmp25Q3U435 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Mmp25Q3U435 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Mmp25Q3U435 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp25Q3U435 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Mmp25Q3U435 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms