Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shcbp1lQ3TTP0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Shcbp1lQ3TTP0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.41■□□□□ 0.38
Shcbp1lQ3TTP0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Shcbp1lQ3TTP0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shcbp1lQ3TTP0 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.41■□□□□ 0.38
Shcbp1lQ3TTP0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shcbp1lQ3TTP0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Shcbp1lQ3TTP0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shcbp1lQ3TTP0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shcbp1lQ3TTP0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shcbp1lQ3TTP0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shcbp1lQ3TTP0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shcbp1lQ3TTP0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Shcbp1lQ3TTP0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shcbp1lQ3TTP0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shcbp1lQ3TTP0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shcbp1lQ3TTP0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Shcbp1lQ3TTP0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shcbp1lQ3TTP0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shcbp1lQ3TTP0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Shcbp1lQ3TTP0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.4■□□□□ 0.38
Shcbp1lQ3TTP0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Shcbp1lQ3TTP0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Shcbp1lQ3TTP0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shcbp1lQ3TTP0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Shcbp1lQ3TTP0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Shcbp1lQ3TTP0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Shcbp1lQ3TTP0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shcbp1lQ3TTP0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shcbp1lQ3TTP0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shcbp1lQ3TTP0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shcbp1lQ3TTP0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shcbp1lQ3TTP0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shcbp1lQ3TTP0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shcbp1lQ3TTP0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Shcbp1lQ3TTP0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shcbp1lQ3TTP0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shcbp1lQ3TTP0 Gm2274-201ENSMUST00000184539 609 ntBASIC17.39■□□□□ 0.37
Shcbp1lQ3TTP0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shcbp1lQ3TTP0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.39■□□□□ 0.37
Shcbp1lQ3TTP0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Shcbp1lQ3TTP0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shcbp1lQ3TTP0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shcbp1lQ3TTP0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shcbp1lQ3TTP0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shcbp1lQ3TTP0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.39■□□□□ 0.37
Shcbp1lQ3TTP0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.39■□□□□ 0.37
Shcbp1lQ3TTP0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shcbp1lQ3TTP0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Shcbp1lQ3TTP0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shcbp1lQ3TTP0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shcbp1lQ3TTP0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shcbp1lQ3TTP0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shcbp1lQ3TTP0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shcbp1lQ3TTP0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Shcbp1lQ3TTP0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shcbp1lQ3TTP0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shcbp1lQ3TTP0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shcbp1lQ3TTP0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shcbp1lQ3TTP0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.38■□□□□ 0.37
Shcbp1lQ3TTP0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.38■□□□□ 0.37
Shcbp1lQ3TTP0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.38■□□□□ 0.37
Shcbp1lQ3TTP0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shcbp1lQ3TTP0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Shcbp1lQ3TTP0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shcbp1lQ3TTP0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shcbp1lQ3TTP0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shcbp1lQ3TTP0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Shcbp1lQ3TTP0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shcbp1lQ3TTP0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shcbp1lQ3TTP0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shcbp1lQ3TTP0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shcbp1lQ3TTP0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.37■□□□□ 0.37
Shcbp1lQ3TTP0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shcbp1lQ3TTP0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.37■□□□□ 0.37
Shcbp1lQ3TTP0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shcbp1lQ3TTP0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shcbp1lQ3TTP0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shcbp1lQ3TTP0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shcbp1lQ3TTP0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Shcbp1lQ3TTP0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shcbp1lQ3TTP0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shcbp1lQ3TTP0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shcbp1lQ3TTP0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shcbp1lQ3TTP0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shcbp1lQ3TTP0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shcbp1lQ3TTP0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shcbp1lQ3TTP0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shcbp1lQ3TTP0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shcbp1lQ3TTP0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.36■□□□□ 0.37
Shcbp1lQ3TTP0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shcbp1lQ3TTP0 Gm7638-201ENSMUST00000121348 967 ntBASIC17.36■□□□□ 0.37
Shcbp1lQ3TTP0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.36■□□□□ 0.37
Shcbp1lQ3TTP0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Shcbp1lQ3TTP0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shcbp1lQ3TTP0 Gm37025-201ENSMUST00000195159 829 ntBASIC17.36■□□□□ 0.37
Shcbp1lQ3TTP0 Gm45058-201ENSMUST00000205810 766 ntBASIC17.36■□□□□ 0.37
Shcbp1lQ3TTP0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.36■□□□□ 0.37
Shcbp1lQ3TTP0 Fst-202ENSMUST00000223640 2612 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms