Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.34□□□□□ -0.11
Trim63Q38HM4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim63Q38HM4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim63Q38HM4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim63Q38HM4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim63Q38HM4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim63Q38HM4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim63Q38HM4 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim63Q38HM4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim63Q38HM4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trim63Q38HM4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.33□□□□□ -0.11
Trim63Q38HM4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim63Q38HM4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim63Q38HM4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Trim63Q38HM4 Gm13216-201ENSMUST00000117145 591 ntBASIC14.33□□□□□ -0.12
Trim63Q38HM4 Gm11687-201ENSMUST00000118911 886 ntBASIC14.33□□□□□ -0.12
Trim63Q38HM4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim63Q38HM4 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.33□□□□□ -0.12
Trim63Q38HM4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim63Q38HM4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim63Q38HM4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim63Q38HM4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim63Q38HM4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trim63Q38HM4 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
Trim63Q38HM4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim63Q38HM4 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim63Q38HM4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim63Q38HM4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim63Q38HM4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trim63Q38HM4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim63Q38HM4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Trim63Q38HM4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim63Q38HM4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim63Q38HM4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim63Q38HM4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Trim63Q38HM4 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim63Q38HM4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim63Q38HM4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim63Q38HM4 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim63Q38HM4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.31□□□□□ -0.12
Trim63Q38HM4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim63Q38HM4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim63Q38HM4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim63Q38HM4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim63Q38HM4 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim63Q38HM4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim63Q38HM4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC14.31□□□□□ -0.12
Trim63Q38HM4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim63Q38HM4 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim63Q38HM4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim63Q38HM4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim63Q38HM4 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.31□□□□□ -0.12
Trim63Q38HM4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim63Q38HM4 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim63Q38HM4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim63Q38HM4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim63Q38HM4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim63Q38HM4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim63Q38HM4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms