Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim72Q1XH17 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim72Q1XH17 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Trim72Q1XH17 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim72Q1XH17 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trim72Q1XH17 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim72Q1XH17 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim72Q1XH17 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.39■□□□□ 0.53
Trim72Q1XH17 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.39■□□□□ 0.53
Trim72Q1XH17 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim72Q1XH17 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim72Q1XH17 Gm38027-201ENSMUST00000192315 235 ntBASIC18.39■□□□□ 0.53
Trim72Q1XH17 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim72Q1XH17 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Trim72Q1XH17 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trim72Q1XH17 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim72Q1XH17 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim72Q1XH17 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim72Q1XH17 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim72Q1XH17 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim72Q1XH17 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim72Q1XH17 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim72Q1XH17 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim72Q1XH17 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim72Q1XH17 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trim72Q1XH17 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim72Q1XH17 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim72Q1XH17 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim72Q1XH17 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Trim72Q1XH17 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trim72Q1XH17 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim72Q1XH17 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim72Q1XH17 Gm12085-201ENSMUST00000119263 940 ntBASIC18.38■□□□□ 0.53
Trim72Q1XH17 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim72Q1XH17 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim72Q1XH17 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim72Q1XH17 Odf3b-204ENSMUST00000227834 930 ntBASIC18.38■□□□□ 0.53
Trim72Q1XH17 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim72Q1XH17 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trim72Q1XH17 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim72Q1XH17 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim72Q1XH17 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim72Q1XH17 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim72Q1XH17 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim72Q1XH17 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim72Q1XH17 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim72Q1XH17 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim72Q1XH17 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim72Q1XH17 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim72Q1XH17 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim72Q1XH17 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim72Q1XH17 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.37■□□□□ 0.53
Trim72Q1XH17 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim72Q1XH17 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim72Q1XH17 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.37■□□□□ 0.53
Trim72Q1XH17 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.37■□□□□ 0.53
Trim72Q1XH17 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim72Q1XH17 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
Trim72Q1XH17 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.37■□□□□ 0.53
Trim72Q1XH17 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim72Q1XH17 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim72Q1XH17 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim72Q1XH17 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim72Q1XH17 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim72Q1XH17 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim72Q1XH17 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim72Q1XH17 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim72Q1XH17 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim72Q1XH17 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim72Q1XH17 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim72Q1XH17 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim72Q1XH17 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim72Q1XH17 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim72Q1XH17 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim72Q1XH17 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim72Q1XH17 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim72Q1XH17 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Trim72Q1XH17 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim72Q1XH17 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim72Q1XH17 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim72Q1XH17 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim72Q1XH17 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim72Q1XH17 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trim72Q1XH17 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim72Q1XH17 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim72Q1XH17 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim72Q1XH17 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim72Q1XH17 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim72Q1XH17 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim72Q1XH17 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim72Q1XH17 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim72Q1XH17 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim72Q1XH17 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim72Q1XH17 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim72Q1XH17 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.35■□□□□ 0.53
Trim72Q1XH17 Gm9731-201ENSMUST00000209480 747 ntBASIC18.35■□□□□ 0.53
Trim72Q1XH17 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trim72Q1XH17 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim72Q1XH17 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim72Q1XH17 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms