Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col19a1Q0VF58 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col19a1Q0VF58 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col19a1Q0VF58 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col19a1Q0VF58 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Col19a1Q0VF58 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col19a1Q0VF58 Gm12260-201ENSMUST00000122447 411 ntBASIC18.43■□□□□ 0.54
Col19a1Q0VF58 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col19a1Q0VF58 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.43■□□□□ 0.54
Col19a1Q0VF58 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col19a1Q0VF58 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col19a1Q0VF58 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col19a1Q0VF58 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col19a1Q0VF58 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col19a1Q0VF58 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col19a1Q0VF58 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col19a1Q0VF58 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col19a1Q0VF58 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Col19a1Q0VF58 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col19a1Q0VF58 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.42■□□□□ 0.54
Col19a1Q0VF58 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col19a1Q0VF58 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col19a1Q0VF58 Golph3-205ENSMUST00000228671 2842 ntBASIC18.42■□□□□ 0.54
Col19a1Q0VF58 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col19a1Q0VF58 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col19a1Q0VF58 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col19a1Q0VF58 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col19a1Q0VF58 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col19a1Q0VF58 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col19a1Q0VF58 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col19a1Q0VF58 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Col19a1Q0VF58 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col19a1Q0VF58 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.41■□□□□ 0.54
Col19a1Q0VF58 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.41■□□□□ 0.54
Col19a1Q0VF58 Gm2756-201ENSMUST00000195851 400 ntBASIC18.41■□□□□ 0.54
Col19a1Q0VF58 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.41■□□□□ 0.54
Col19a1Q0VF58 Psmb5-202ENSMUST00000227257 622 ntBASIC18.41■□□□□ 0.54
Col19a1Q0VF58 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col19a1Q0VF58 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Col19a1Q0VF58 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.41■□□□□ 0.54
Col19a1Q0VF58 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col19a1Q0VF58 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col19a1Q0VF58 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col19a1Q0VF58 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Col19a1Q0VF58 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col19a1Q0VF58 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.4■□□□□ 0.54
Col19a1Q0VF58 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col19a1Q0VF58 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.4■□□□□ 0.54
Col19a1Q0VF58 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.4■□□□□ 0.54
Col19a1Q0VF58 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col19a1Q0VF58 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col19a1Q0VF58 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col19a1Q0VF58 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col19a1Q0VF58 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col19a1Q0VF58 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col19a1Q0VF58 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col19a1Q0VF58 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.4■□□□□ 0.54
Col19a1Q0VF58 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Col19a1Q0VF58 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.39■□□□□ 0.54
Col19a1Q0VF58 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col19a1Q0VF58 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col19a1Q0VF58 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.39■□□□□ 0.53
Col19a1Q0VF58 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.39■□□□□ 0.53
Col19a1Q0VF58 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.39■□□□□ 0.53
Col19a1Q0VF58 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Col19a1Q0VF58 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col19a1Q0VF58 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col19a1Q0VF58 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Col19a1Q0VF58 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.39■□□□□ 0.53
Col19a1Q0VF58 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col19a1Q0VF58 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col19a1Q0VF58 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col19a1Q0VF58 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col19a1Q0VF58 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col19a1Q0VF58 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Gm14494-201ENSMUST00000118786 435 ntBASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Gm24513-201ENSMUST00000174964 138 ntBASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Gm27397-201ENSMUST00000184997 107 ntBASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.38■□□□□ 0.53
Col19a1Q0VF58 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Phf7-203ENSMUST00000226565 1971 ntBASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col19a1Q0VF58 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col19a1Q0VF58 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms