Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra1P97785 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Gfra1P97785 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Gfra1P97785 Gm7977-201ENSMUST00000193787 748 ntBASIC14.28□□□□□ -0.12
Gfra1P97785 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra1P97785 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.28□□□□□ -0.12
Gfra1P97785 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra1P97785 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.28□□□□□ -0.12
Gfra1P97785 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra1P97785 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra1P97785 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Gfra1P97785 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra1P97785 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra1P97785 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Gfra1P97785 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gfra1P97785 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gfra1P97785 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfra1P97785 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.27□□□□□ -0.12
Gfra1P97785 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gfra1P97785 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfra1P97785 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfra1P97785 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Gfra1P97785 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfra1P97785 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.27□□□□□ -0.13
Gfra1P97785 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Gfra1P97785 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gfra1P97785 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.27□□□□□ -0.13
Gfra1P97785 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Gfra1P97785 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gfra1P97785 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gfra1P97785 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gfra1P97785 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gfra1P97785 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gfra1P97785 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gfra1P97785 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Gfra1P97785 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Gfra1P97785 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.26□□□□□ -0.13
Gfra1P97785 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.26□□□□□ -0.13
Gfra1P97785 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 Gm7889-201ENSMUST00000185591 958 ntBASIC14.26□□□□□ -0.13
Gfra1P97785 Gm37025-201ENSMUST00000195159 829 ntBASIC14.26□□□□□ -0.13
Gfra1P97785 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfra1P97785 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra1P97785 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra1P97785 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra1P97785 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.25□□□□□ -0.13
Gfra1P97785 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.25□□□□□ -0.13
Gfra1P97785 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra1P97785 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Gfra1P97785 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.25□□□□□ -0.13
Gfra1P97785 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.25□□□□□ -0.13
Gfra1P97785 Gm2274-201ENSMUST00000184539 609 ntBASIC14.25□□□□□ -0.13
Gfra1P97785 Gm18959-201ENSMUST00000208954 655 ntBASIC14.25□□□□□ -0.13
Gfra1P97785 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra1P97785 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.25□□□□□ -0.13
Gfra1P97785 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra1P97785 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra1P97785 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra1P97785 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Gfra1P97785 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra1P97785 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Gfra1P97785 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra1P97785 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra1P97785 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.25□□□□□ -0.13
Gfra1P97785 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra1P97785 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Gfra1P97785 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra1P97785 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra1P97785 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Gfra1P97785 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra1P97785 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfra1P97785 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gfra1P97785 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gfra1P97785 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gfra1P97785 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gfra1P97785 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gfra1P97785 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gfra1P97785 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gfra1P97785 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms