Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx2-3P97334 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx2-3P97334 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx2-3P97334 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx2-3P97334 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx2-3P97334 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx2-3P97334 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx2-3P97334 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC21.79■■□□□ 1.08
Nkx2-3P97334 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx2-3P97334 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC21.79■■□□□ 1.08
Nkx2-3P97334 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx2-3P97334 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx2-3P97334 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC21.79■■□□□ 1.08
Nkx2-3P97334 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx2-3P97334 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx2-3P97334 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Nkx2-3P97334 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx2-3P97334 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nkx2-3P97334 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nkx2-3P97334 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC21.78■■□□□ 1.08
Nkx2-3P97334 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC21.78■■□□□ 1.08
Nkx2-3P97334 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC21.78■■□□□ 1.08
Nkx2-3P97334 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nkx2-3P97334 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nkx2-3P97334 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nkx2-3P97334 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.77■■□□□ 1.08
Nkx2-3P97334 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Nkx2-3P97334 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nkx2-3P97334 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nkx2-3P97334 Gm7153-201ENSMUST00000117092 455 ntBASIC21.77■■□□□ 1.08
Nkx2-3P97334 Gm13186-201ENSMUST00000118031 316 ntBASIC21.77■■□□□ 1.08
Nkx2-3P97334 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nkx2-3P97334 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nkx2-3P97334 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nkx2-3P97334 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nkx2-3P97334 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nkx2-3P97334 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nkx2-3P97334 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Nkx2-3P97334 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-3P97334 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-3P97334 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-3P97334 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-3P97334 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
Nkx2-3P97334 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC21.76■■□□□ 1.07
Nkx2-3P97334 Gm45328-201ENSMUST00000210942 917 ntBASIC21.76■■□□□ 1.07
Nkx2-3P97334 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-3P97334 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-3P97334 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-3P97334 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-3P97334 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-3P97334 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-3P97334 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-3P97334 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.75■■□□□ 1.07
Nkx2-3P97334 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nkx2-3P97334 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nkx2-3P97334 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nkx2-3P97334 Gm24589-201ENSMUST00000116692 94 ntBASIC21.75■■□□□ 1.07
Nkx2-3P97334 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC21.75■■□□□ 1.07
Nkx2-3P97334 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nkx2-3P97334 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC21.75■■□□□ 1.07
Nkx2-3P97334 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Nkx2-3P97334 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC21.75■■□□□ 1.07
Nkx2-3P97334 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nkx2-3P97334 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nkx2-3P97334 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nkx2-3P97334 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nkx2-3P97334 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-3P97334 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-3P97334 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-3P97334 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-3P97334 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-3P97334 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-3P97334 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC21.74■■□□□ 1.07
Nkx2-3P97334 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-3P97334 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-3P97334 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-3P97334 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-3P97334 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-3P97334 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-3P97334 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Nkx2-3P97334 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Nkx2-3P97334 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Nkx2-3P97334 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nkx2-3P97334 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Nkx2-3P97334 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Nkx2-3P97334 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nkx2-3P97334 Gm11336-201ENSMUST00000118168 334 ntBASIC21.73■■□□□ 1.07
Nkx2-3P97334 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Nkx2-3P97334 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nkx2-3P97334 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nkx2-3P97334 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nkx2-3P97334 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nkx2-3P97334 Gm37194-201ENSMUST00000193092 3031 ntBASIC21.72■■□□□ 1.07
Nkx2-3P97334 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nkx2-3P97334 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nkx2-3P97334 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nkx2-3P97334 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Nkx2-3P97334 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nkx2-3P97334 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nkx2-3P97334 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms