Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrkdcP97313 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrkdcP97313 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PrkdcP97313 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PrkdcP97313 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PrkdcP97313 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
PrkdcP97313 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
PrkdcP97313 Gm13036-201ENSMUST00000117799 748 ntBASIC11.86□□□□□ -0.51
PrkdcP97313 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
PrkdcP97313 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
PrkdcP97313 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
PrkdcP97313 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
PrkdcP97313 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PrkdcP97313 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
PrkdcP97313 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
PrkdcP97313 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PrkdcP97313 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PrkdcP97313 Gm23547-201ENSMUST00000158210 271 ntBASIC11.86□□□□□ -0.51
PrkdcP97313 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.86□□□□□ -0.51
PrkdcP97313 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
PrkdcP97313 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
PrkdcP97313 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PrkdcP97313 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
PrkdcP97313 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.86□□□□□ -0.51
PrkdcP97313 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PrkdcP97313 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.86□□□□□ -0.51
PrkdcP97313 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC11.86□□□□□ -0.51
PrkdcP97313 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PrkdcP97313 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PrkdcP97313 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC11.86□□□□□ -0.51
PrkdcP97313 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PrkdcP97313 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
PrkdcP97313 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
PrkdcP97313 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC11.85□□□□□ -0.51
PrkdcP97313 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PrkdcP97313 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PrkdcP97313 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
PrkdcP97313 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
PrkdcP97313 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PrkdcP97313 Gm13312-201ENSMUST00000119631 718 ntBASIC11.85□□□□□ -0.51
PrkdcP97313 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PrkdcP97313 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.85□□□□□ -0.51
PrkdcP97313 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
PrkdcP97313 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PrkdcP97313 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
PrkdcP97313 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PrkdcP97313 Gm25990-201ENSMUST00000102440 86 ntBASIC11.84□□□□□ -0.51
PrkdcP97313 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.84□□□□□ -0.51
PrkdcP97313 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC11.84□□□□□ -0.51
PrkdcP97313 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PrkdcP97313 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PrkdcP97313 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
PrkdcP97313 Gm15920-201ENSMUST00000118998 402 ntBASIC11.84□□□□□ -0.51
PrkdcP97313 Gm5745-201ENSMUST00000183748 313 ntBASIC11.84□□□□□ -0.51
PrkdcP97313 Hsf1-207ENSMUST00000228371 2102 ntBASIC11.84□□□□□ -0.51
PrkdcP97313 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PrkdcP97313 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PrkdcP97313 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PrkdcP97313 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PrkdcP97313 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
PrkdcP97313 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PrkdcP97313 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PrkdcP97313 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PrkdcP97313 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PrkdcP97313 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.84□□□□□ -0.51
PrkdcP97313 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PrkdcP97313 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PrkdcP97313 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PrkdcP97313 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
PrkdcP97313 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PrkdcP97313 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PrkdcP97313 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PrkdcP97313 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PrkdcP97313 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC11.83□□□□□ -0.52
PrkdcP97313 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PrkdcP97313 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.83□□□□□ -0.52
PrkdcP97313 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.83□□□□□ -0.52
PrkdcP97313 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PrkdcP97313 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PrkdcP97313 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PrkdcP97313 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PrkdcP97313 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
PrkdcP97313 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
PrkdcP97313 Gm27397-201ENSMUST00000184997 107 ntBASIC11.83□□□□□ -0.52
PrkdcP97313 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrkdcP97313 Gm14701-201ENSMUST00000117156 348 ntBASIC11.82□□□□□ -0.52
PrkdcP97313 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
PrkdcP97313 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.82□□□□□ -0.52
PrkdcP97313 Gm20949-201ENSMUST00000206478 952 ntBASIC11.82□□□□□ -0.52
PrkdcP97313 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.82□□□□□ -0.52
PrkdcP97313 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
PrkdcP97313 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrkdcP97313 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PrkdcP97313 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrkdcP97313 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
PrkdcP97313 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrkdcP97313 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.82□□□□□ -0.52
PrkdcP97313 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.82□□□□□ -0.52
PrkdcP97313 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.82□□□□□ -0.52
PrkdcP97313 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms