Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shox2P70390 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shox2P70390 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
Shox2P70390 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shox2P70390 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shox2P70390 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shox2P70390 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.12■□□□□ 0.33
Shox2P70390 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shox2P70390 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shox2P70390 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shox2P70390 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shox2P70390 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.12■□□□□ 0.33
Shox2P70390 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shox2P70390 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shox2P70390 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Shox2P70390 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Shox2P70390 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shox2P70390 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shox2P70390 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.11■□□□□ 0.33
Shox2P70390 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Shox2P70390 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shox2P70390 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shox2P70390 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shox2P70390 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shox2P70390 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Shox2P70390 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Shox2P70390 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shox2P70390 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.11■□□□□ 0.33
Shox2P70390 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.11■□□□□ 0.33
Shox2P70390 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shox2P70390 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shox2P70390 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shox2P70390 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shox2P70390 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.11■□□□□ 0.33
Shox2P70390 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shox2P70390 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shox2P70390 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Shox2P70390 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shox2P70390 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.11■□□□□ 0.33
Shox2P70390 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shox2P70390 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.1■□□□□ 0.33
Shox2P70390 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shox2P70390 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shox2P70390 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shox2P70390 Gm10418-201ENSMUST00000100943 576 ntBASIC17.1■□□□□ 0.33
Shox2P70390 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shox2P70390 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.1■□□□□ 0.33
Shox2P70390 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.1■□□□□ 0.33
Shox2P70390 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shox2P70390 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shox2P70390 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.1■□□□□ 0.33
Shox2P70390 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shox2P70390 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Shox2P70390 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shox2P70390 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shox2P70390 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shox2P70390 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shox2P70390 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shox2P70390 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shox2P70390 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shox2P70390 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shox2P70390 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shox2P70390 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shox2P70390 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shox2P70390 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shox2P70390 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Shox2P70390 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Shox2P70390 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Shox2P70390 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.09■□□□□ 0.33
Shox2P70390 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shox2P70390 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Shox2P70390 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shox2P70390 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shox2P70390 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Shox2P70390 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Shox2P70390 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Shox2P70390 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shox2P70390 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shox2P70390 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Shox2P70390 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shox2P70390 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Shox2P70390 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Shox2P70390 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shox2P70390 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shox2P70390 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shox2P70390 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Shox2P70390 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shox2P70390 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shox2P70390 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shox2P70390 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shox2P70390 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shox2P70390 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.08■□□□□ 0.32
Shox2P70390 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shox2P70390 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Shox2P70390 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shox2P70390 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Shox2P70390 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shox2P70390 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shox2P70390 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shox2P70390 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms