Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Crnkl1P63154 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Crnkl1P63154 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Crnkl1P63154 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Crnkl1P63154 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Crnkl1P63154 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Crnkl1P63154 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Crnkl1P63154 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.1■□□□□ 0.33
Crnkl1P63154 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Crnkl1P63154 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Crnkl1P63154 Gm7291-201ENSMUST00000199147 382 ntBASIC17.1■□□□□ 0.33
Crnkl1P63154 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.1■□□□□ 0.33
Crnkl1P63154 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Crnkl1P63154 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Crnkl1P63154 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Crnkl1P63154 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Crnkl1P63154 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.1■□□□□ 0.33
Crnkl1P63154 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Crnkl1P63154 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Crnkl1P63154 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Crnkl1P63154 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Crnkl1P63154 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Crnkl1P63154 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Crnkl1P63154 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Crnkl1P63154 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Crnkl1P63154 Idnk-204ENSMUST00000226010 1898 ntBASIC17.09■□□□□ 0.33
Crnkl1P63154 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Crnkl1P63154 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Crnkl1P63154 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Crnkl1P63154 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Crnkl1P63154 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.09■□□□□ 0.33
Crnkl1P63154 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Crnkl1P63154 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Crnkl1P63154 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Crnkl1P63154 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Crnkl1P63154 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Crnkl1P63154 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.08■□□□□ 0.33
Crnkl1P63154 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Crnkl1P63154 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Crnkl1P63154 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.08■□□□□ 0.32
Crnkl1P63154 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.08■□□□□ 0.32
Crnkl1P63154 Gm7514-201ENSMUST00000209475 934 ntBASIC17.08■□□□□ 0.32
Crnkl1P63154 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.08■□□□□ 0.32
Crnkl1P63154 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Crnkl1P63154 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Crnkl1P63154 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Crnkl1P63154 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Crnkl1P63154 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Crnkl1P63154 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Crnkl1P63154 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Crnkl1P63154 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Crnkl1P63154 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crnkl1P63154 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crnkl1P63154 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crnkl1P63154 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crnkl1P63154 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Crnkl1P63154 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crnkl1P63154 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Crnkl1P63154 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Crnkl1P63154 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.07■□□□□ 0.32
Crnkl1P63154 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.07■□□□□ 0.32
Crnkl1P63154 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crnkl1P63154 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crnkl1P63154 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.07■□□□□ 0.32
Crnkl1P63154 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crnkl1P63154 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crnkl1P63154 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crnkl1P63154 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crnkl1P63154 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crnkl1P63154 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crnkl1P63154 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.06■□□□□ 0.32
Crnkl1P63154 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Crnkl1P63154 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.06■□□□□ 0.32
Crnkl1P63154 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crnkl1P63154 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crnkl1P63154 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crnkl1P63154 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crnkl1P63154 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Crnkl1P63154 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crnkl1P63154 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Crnkl1P63154 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.06■□□□□ 0.32
Crnkl1P63154 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.06■□□□□ 0.32
Crnkl1P63154 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Crnkl1P63154 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.06■□□□□ 0.32
Crnkl1P63154 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.06■□□□□ 0.32
Crnkl1P63154 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crnkl1P63154 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crnkl1P63154 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crnkl1P63154 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crnkl1P63154 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Crnkl1P63154 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Crnkl1P63154 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Crnkl1P63154 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.05■□□□□ 0.32
Crnkl1P63154 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Crnkl1P63154 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Crnkl1P63154 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Crnkl1P63154 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Crnkl1P63154 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Crnkl1P63154 Gm13146-201ENSMUST00000118508 780 ntBASIC17.05■□□□□ 0.32
Crnkl1P63154 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms