Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm6P62313 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm6P62313 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm6P62313 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm6P62313 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm6P62313 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm6P62313 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm6P62313 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm6P62313 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm6P62313 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm6P62313 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm6P62313 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Lsm6P62313 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm6P62313 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm6P62313 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm6P62313 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Lsm6P62313 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.13■□□□□ 0.01
Lsm6P62313 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm6P62313 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.13■□□□□ 0.01
Lsm6P62313 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm6P62313 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm6P62313 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Lsm6P62313 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm6P62313 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm6P62313 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm6P62313 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm6P62313 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm6P62313 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm6P62313 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm6P62313 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm6P62313 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Lsm6P62313 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm6P62313 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm6P62313 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm6P62313 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Lsm6P62313 Gm24841-201ENSMUST00000158676 357 ntBASIC15.12■□□□□ 0.01
Lsm6P62313 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm6P62313 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Lsm6P62313 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
Lsm6P62313 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm6P62313 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm6P62313 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.12■□□□□ 0.01
Lsm6P62313 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm6P62313 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Lsm6P62313 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.11■□□□□ 0.01
Lsm6P62313 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.11■□□□□ 0.01
Lsm6P62313 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm6P62313 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.11■□□□□ 0.01
Lsm6P62313 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm6P62313 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.11■□□□□ 0.01
Lsm6P62313 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm6P62313 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm6P62313 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm6P62313 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm6P62313 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm6P62313 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm6P62313 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm6P62313 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm6P62313 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm6P62313 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm6P62313 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm6P62313 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm6P62313 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm6P62313 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm6P62313 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm6P62313 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm6P62313 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm6P62313 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm6P62313 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm6P62313 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm6P62313 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm6P62313 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm6P62313 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm6P62313 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm6P62313 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.1■□□□□ 0.01
Lsm6P62313 Gm13168-201ENSMUST00000121771 632 ntBASIC15.1■□□□□ 0.01
Lsm6P62313 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm6P62313 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm6P62313 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm6P62313 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm6P62313 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm6P62313 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm6P62313 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm6P62313 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.1■□□□□ 0.01
Lsm6P62313 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm6P62313 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Lsm6P62313 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.1■□□□□ 0.01
Lsm6P62313 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm6P62313 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm6P62313 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm6P62313 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm6P62313 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm6P62313 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm6P62313 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm6P62313 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm6P62313 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm6P62313 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm6P62313 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm6P62313 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm6P62313 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms