Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Lrch1P62046 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.31■□□□□ 0.84
Lrch1P62046 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lrch1P62046 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Lrch1P62046 Gm11336-201ENSMUST00000118168 334 ntBASIC20.31■□□□□ 0.84
Lrch1P62046 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lrch1P62046 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lrch1P62046 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.31■□□□□ 0.84
Lrch1P62046 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lrch1P62046 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Lrch1P62046 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Lrch1P62046 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Lrch1P62046 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Lrch1P62046 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lrch1P62046 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lrch1P62046 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrch1P62046 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrch1P62046 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Lrch1P62046 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.3■□□□□ 0.84
Lrch1P62046 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrch1P62046 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lrch1P62046 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrch1P62046 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrch1P62046 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrch1P62046 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrch1P62046 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.29■□□□□ 0.84
Lrch1P62046 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrch1P62046 Gm12644-201ENSMUST00000119935 606 ntBASIC20.29■□□□□ 0.84
Lrch1P62046 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lrch1P62046 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.29■□□□□ 0.84
Lrch1P62046 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrch1P62046 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Lrch1P62046 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lrch1P62046 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.29■□□□□ 0.84
Lrch1P62046 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Lrch1P62046 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrch1P62046 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Lrch1P62046 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Lrch1P62046 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lrch1P62046 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrch1P62046 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.28■□□□□ 0.84
Lrch1P62046 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrch1P62046 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrch1P62046 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrch1P62046 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.28■□□□□ 0.84
Lrch1P62046 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrch1P62046 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrch1P62046 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrch1P62046 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.28■□□□□ 0.84
Lrch1P62046 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrch1P62046 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.28■□□□□ 0.84
Lrch1P62046 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.28■□□□□ 0.84
Lrch1P62046 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.28■□□□□ 0.84
Lrch1P62046 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrch1P62046 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Lrch1P62046 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrch1P62046 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Lrch1P62046 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.28■□□□□ 0.84
Lrch1P62046 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrch1P62046 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrch1P62046 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrch1P62046 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lrch1P62046 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Lrch1P62046 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lrch1P62046 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Lrch1P62046 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrch1P62046 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrch1P62046 Gm7862-201ENSMUST00000121461 292 ntBASIC20.27■□□□□ 0.84
Lrch1P62046 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
Lrch1P62046 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrch1P62046 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrch1P62046 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lrch1P62046 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Lrch1P62046 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lrch1P62046 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Lrch1P62046 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Lrch1P62046 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrch1P62046 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrch1P62046 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrch1P62046 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.26■□□□□ 0.83
Lrch1P62046 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrch1P62046 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.26■□□□□ 0.83
Lrch1P62046 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lrch1P62046 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.26■□□□□ 0.83
Lrch1P62046 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.26■□□□□ 0.83
Lrch1P62046 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lrch1P62046 Gm8000-201ENSMUST00000188378 592 ntBASIC20.26■□□□□ 0.83
Lrch1P62046 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lrch1P62046 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC20.26■□□□□ 0.83
Lrch1P62046 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrch1P62046 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrch1P62046 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.26■□□□□ 0.83
Lrch1P62046 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrch1P62046 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Lrch1P62046 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrch1P62046 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lrch1P62046 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrch1P62046 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lrch1P62046 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Lrch1P62046 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms