Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a1P61620 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a1P61620 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a1P61620 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a1P61620 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a1P61620 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.22■□□□□ 0.03
Sec61a1P61620 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.22■□□□□ 0.03
Sec61a1P61620 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sec61a1P61620 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a1P61620 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.22■□□□□ 0.03
Sec61a1P61620 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.22■□□□□ 0.03
Sec61a1P61620 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a1P61620 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a1P61620 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.22■□□□□ 0.03
Sec61a1P61620 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a1P61620 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a1P61620 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a1P61620 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a1P61620 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a1P61620 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a1P61620 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a1P61620 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a1P61620 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Sec61a1P61620 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a1P61620 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sec61a1P61620 Gm27275-201ENSMUST00000184318 272 ntBASIC15.21■□□□□ 0.03
Sec61a1P61620 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.21■□□□□ 0.03
Sec61a1P61620 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a1P61620 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Sec61a1P61620 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a1P61620 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a1P61620 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a1P61620 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a1P61620 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a1P61620 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a1P61620 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a1P61620 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Sec61a1P61620 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a1P61620 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a1P61620 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sec61a1P61620 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a1P61620 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a1P61620 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a1P61620 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a1P61620 Gm12896-201ENSMUST00000118430 226 ntBASIC15.2■□□□□ 0.02
Sec61a1P61620 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a1P61620 Gm20760-201ENSMUST00000179197 648 ntBASIC15.2■□□□□ 0.02
Sec61a1P61620 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.2■□□□□ 0.02
Sec61a1P61620 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.2■□□□□ 0.02
Sec61a1P61620 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a1P61620 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a1P61620 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a1P61620 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Sec61a1P61620 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a1P61620 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Sec61a1P61620 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sec61a1P61620 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sec61a1P61620 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.19■□□□□ 0.02
Sec61a1P61620 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.19■□□□□ 0.02
Sec61a1P61620 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sec61a1P61620 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sec61a1P61620 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sec61a1P61620 Trmt13-210ENSMUST00000198454 880 ntBASIC15.19■□□□□ 0.02
Sec61a1P61620 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Sec61a1P61620 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Sec61a1P61620 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.19■□□□□ 0.02
Sec61a1P61620 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Sec61a1P61620 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sec61a1P61620 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sec61a1P61620 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sec61a1P61620 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sec61a1P61620 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sec61a1P61620 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sec61a1P61620 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sec61a1P61620 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sec61a1P61620 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sec61a1P61620 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Sec61a1P61620 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sec61a1P61620 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sec61a1P61620 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.17■□□□□ 0.02
Sec61a1P61620 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a1P61620 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a1P61620 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Sec61a1P61620 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a1P61620 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a1P61620 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a1P61620 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sec61a1P61620 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a1P61620 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a1P61620 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a1P61620 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a1P61620 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.17■□□□□ 0.02
Sec61a1P61620 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a1P61620 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.17■□□□□ 0.02
Sec61a1P61620 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a1P61620 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a1P61620 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.17■□□□□ 0.02
Sec61a1P61620 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.17■□□□□ 0.02
Sec61a1P61620 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a1P61620 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms