Protein–RNA interactions for Protein: P57780

Actn4, Alpha-actinin-4, mousemouse

Known RBP Predictions only

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Actn4P57780 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Actn4P57780 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.65■□□□□ 0.58
Actn4P57780 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Actn4P57780 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Actn4P57780 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Actn4P57780 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Actn4P57780 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Actn4P57780 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Actn4P57780 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Actn4P57780 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Actn4P57780 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
Actn4P57780 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Actn4P57780 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.65■□□□□ 0.58
Actn4P57780 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.65■□□□□ 0.58
Actn4P57780 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.65■□□□□ 0.58
Actn4P57780 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Actn4P57780 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Actn4P57780 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Actn4P57780 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Actn4P57780 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Actn4P57780 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Actn4P57780 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Actn4P57780 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Actn4P57780 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Actn4P57780 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Actn4P57780 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Actn4P57780 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Actn4P57780 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Actn4P57780 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.64■□□□□ 0.57
Actn4P57780 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.64■□□□□ 0.57
Actn4P57780 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Actn4P57780 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Actn4P57780 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Actn4P57780 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.64■□□□□ 0.57
Actn4P57780 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Actn4P57780 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Actn4P57780 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Actn4P57780 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.63■□□□□ 0.57
Actn4P57780 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Actn4P57780 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Actn4P57780 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Actn4P57780 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Actn4P57780 Gm15375-201ENSMUST00000119510 849 ntBASIC18.63■□□□□ 0.57
Actn4P57780 Gm10138-203ENSMUST00000206952 366 ntBASIC18.63■□□□□ 0.57
Actn4P57780 Gm10602-201ENSMUST00000098239 609 ntBASIC18.63■□□□□ 0.57
Actn4P57780 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Actn4P57780 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Actn4P57780 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Actn4P57780 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Actn4P57780 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Actn4P57780 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Actn4P57780 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Actn4P57780 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Actn4P57780 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Actn4P57780 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Actn4P57780 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Actn4P57780 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Actn4P57780 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Actn4P57780 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Actn4P57780 Gm12106-201ENSMUST00000116006 1200 ntBASIC18.62■□□□□ 0.57
Actn4P57780 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Actn4P57780 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.62■□□□□ 0.57
Actn4P57780 Mir6349-201ENSMUST00000184059 97 ntBASIC18.62■□□□□ 0.57
Actn4P57780 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.62■□□□□ 0.57
Actn4P57780 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Actn4P57780 Gm37319-201ENSMUST00000193500 636 ntBASIC18.62■□□□□ 0.57
Actn4P57780 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Actn4P57780 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Actn4P57780 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Actn4P57780 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Actn4P57780 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Actn4P57780 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Actn4P57780 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Actn4P57780 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Actn4P57780 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Actn4P57780 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Actn4P57780 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Actn4P57780 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Actn4P57780 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Actn4P57780 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.61■□□□□ 0.57
Actn4P57780 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Actn4P57780 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Actn4P57780 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Actn4P57780 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Actn4P57780 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Actn4P57780 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Actn4P57780 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Actn4P57780 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.6■□□□□ 0.57
Actn4P57780 Gm27275-201ENSMUST00000184318 272 ntBASIC18.6■□□□□ 0.57
Actn4P57780 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.6■□□□□ 0.57
Actn4P57780 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Actn4P57780 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Actn4P57780 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Actn4P57780 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Actn4P57780 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Actn4P57780 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Actn4P57780 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Actn4P57780 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Actn4P57780 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Actn4P57780 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms