Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.24■□□□□ 0.51
NcanP55066 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NcanP55066 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NcanP55066 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NcanP55066 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.23■□□□□ 0.51
NcanP55066 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NcanP55066 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NcanP55066 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NcanP55066 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NcanP55066 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NcanP55066 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
NcanP55066 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NcanP55066 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NcanP55066 Gm13127-201ENSMUST00000118978 1389 ntBASIC18.23■□□□□ 0.51
NcanP55066 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.23■□□□□ 0.51
NcanP55066 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NcanP55066 Gm15165-201ENSMUST00000118140 502 ntBASIC18.23■□□□□ 0.51
NcanP55066 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.23■□□□□ 0.51
NcanP55066 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NcanP55066 Gm27867-201ENSMUST00000184778 125 ntBASIC18.23■□□□□ 0.51
NcanP55066 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
NcanP55066 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NcanP55066 Gm10060-201ENSMUST00000212002 111 ntBASIC18.23■□□□□ 0.51
NcanP55066 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NcanP55066 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NcanP55066 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
NcanP55066 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NcanP55066 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NcanP55066 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NcanP55066 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NcanP55066 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
NcanP55066 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NcanP55066 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.22■□□□□ 0.51
NcanP55066 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NcanP55066 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NcanP55066 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.22■□□□□ 0.51
NcanP55066 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NcanP55066 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NcanP55066 Gm4995-201ENSMUST00000117247 432 ntBASIC18.22■□□□□ 0.51
NcanP55066 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NcanP55066 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.22■□□□□ 0.51
NcanP55066 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NcanP55066 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NcanP55066 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
NcanP55066 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NcanP55066 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NcanP55066 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.21■□□□□ 0.51
NcanP55066 BC021767-201ENSMUST00000126387 1716 ntBASIC18.21■□□□□ 0.51
NcanP55066 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NcanP55066 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.21■□□□□ 0.51
NcanP55066 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NcanP55066 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NcanP55066 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.21■□□□□ 0.51
NcanP55066 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
NcanP55066 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.21■□□□□ 0.51
NcanP55066 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.21■□□□□ 0.51
NcanP55066 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NcanP55066 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NcanP55066 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NcanP55066 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NcanP55066 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NcanP55066 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.21■□□□□ 0.51
NcanP55066 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NcanP55066 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NcanP55066 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NcanP55066 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NcanP55066 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.2■□□□□ 0.5
NcanP55066 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
NcanP55066 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.2■□□□□ 0.5
NcanP55066 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NcanP55066 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.2■□□□□ 0.5
NcanP55066 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NcanP55066 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NcanP55066 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.2■□□□□ 0.5
NcanP55066 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NcanP55066 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NcanP55066 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NcanP55066 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NcanP55066 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NcanP55066 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NcanP55066 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
NcanP55066 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NcanP55066 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NcanP55066 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NcanP55066 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NcanP55066 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NcanP55066 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NcanP55066 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NcanP55066 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NcanP55066 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NcanP55066 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.19■□□□□ 0.5
NcanP55066 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NcanP55066 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NcanP55066 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NcanP55066 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NcanP55066 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NcanP55066 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NcanP55066 Phf7-203ENSMUST00000226565 1971 ntBASIC18.19■□□□□ 0.5
NcanP55066 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.19■□□□□ 0.5
NcanP55066 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms