Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.11■□□□□ 0.33
Atxn1P54254 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn1P54254 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn1P54254 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn1P54254 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn1P54254 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn1P54254 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Atxn1P54254 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn1P54254 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn1P54254 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn1P54254 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn1P54254 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.1■□□□□ 0.33
Atxn1P54254 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn1P54254 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn1P54254 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Atxn1P54254 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn1P54254 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn1P54254 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn1P54254 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn1P54254 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn1P54254 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Atxn1P54254 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn1P54254 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn1P54254 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.1■□□□□ 0.33
Atxn1P54254 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn1P54254 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn1P54254 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Atxn1P54254 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.09■□□□□ 0.33
Atxn1P54254 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn1P54254 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn1P54254 Mir2861-201ENSMUST00000175539 82 ntBASIC17.09■□□□□ 0.33
Atxn1P54254 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn1P54254 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn1P54254 Mir1668-201ENSMUST00000184114 107 ntBASIC17.09■□□□□ 0.33
Atxn1P54254 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.09■□□□□ 0.33
Atxn1P54254 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn1P54254 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Atxn1P54254 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn1P54254 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn1P54254 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn1P54254 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn1P54254 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn1P54254 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn1P54254 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn1P54254 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn1P54254 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn1P54254 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn1P54254 Fst-202ENSMUST00000223640 2612 ntBASIC17.09■□□□□ 0.33
Atxn1P54254 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn1P54254 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atxn1P54254 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.08■□□□□ 0.33
Atxn1P54254 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atxn1P54254 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atxn1P54254 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atxn1P54254 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Atxn1P54254 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Atxn1P54254 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atxn1P54254 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.08■□□□□ 0.32
Atxn1P54254 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.08■□□□□ 0.32
Atxn1P54254 Gm34391-201ENSMUST00000203706 907 ntBASIC17.08■□□□□ 0.32
Atxn1P54254 Gm7370-201ENSMUST00000219471 767 ntBASIC17.08■□□□□ 0.32
Atxn1P54254 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Atxn1P54254 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atxn1P54254 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Atxn1P54254 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atxn1P54254 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atxn1P54254 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atxn1P54254 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atxn1P54254 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn1P54254 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn1P54254 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn1P54254 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Atxn1P54254 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Atxn1P54254 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn1P54254 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn1P54254 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Atxn1P54254 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn1P54254 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Atxn1P54254 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.07■□□□□ 0.32
Atxn1P54254 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn1P54254 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn1P54254 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.07■□□□□ 0.32
Atxn1P54254 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn1P54254 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn1P54254 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn1P54254 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Atxn1P54254 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn1P54254 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Atxn1P54254 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn1P54254 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn1P54254 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn1P54254 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.07■□□□□ 0.32
Atxn1P54254 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn1P54254 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn1P54254 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn1P54254 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Atxn1P54254 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn1P54254 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn1P54254 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.06■□□□□ 0.32
Atxn1P54254 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms