Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox3P53784 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox3P53784 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox3P53784 Zfp783-201ENSMUST00000095946 670 ntBASIC16.52■□□□□ 0.24
Sox3P53784 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox3P53784 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox3P53784 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox3P53784 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox3P53784 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sox3P53784 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox3P53784 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox3P53784 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox3P53784 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.51■□□□□ 0.23
Sox3P53784 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox3P53784 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox3P53784 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox3P53784 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.51■□□□□ 0.23
Sox3P53784 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.51■□□□□ 0.23
Sox3P53784 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.51■□□□□ 0.23
Sox3P53784 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.51■□□□□ 0.23
Sox3P53784 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.51■□□□□ 0.23
Sox3P53784 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox3P53784 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.51■□□□□ 0.23
Sox3P53784 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox3P53784 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox3P53784 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Sox3P53784 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox3P53784 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox3P53784 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Sox3P53784 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Sox3P53784 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox3P53784 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Sox3P53784 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox3P53784 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Sox3P53784 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox3P53784 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox3P53784 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox3P53784 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sox3P53784 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox3P53784 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox3P53784 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox3P53784 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox3P53784 Gm44771-201ENSMUST00000206975 626 ntBASIC16.5■□□□□ 0.23
Sox3P53784 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.5■□□□□ 0.23
Sox3P53784 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox3P53784 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox3P53784 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sox3P53784 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.5■□□□□ 0.23
Sox3P53784 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox3P53784 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox3P53784 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sox3P53784 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox3P53784 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox3P53784 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Sox3P53784 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Sox3P53784 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox3P53784 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.49■□□□□ 0.23
Sox3P53784 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox3P53784 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Sox3P53784 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox3P53784 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.49■□□□□ 0.23
Sox3P53784 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Sox3P53784 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Sox3P53784 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox3P53784 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox3P53784 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox3P53784 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sox3P53784 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Sox3P53784 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Sox3P53784 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox3P53784 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Sox3P53784 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sox3P53784 Gm7284-201ENSMUST00000131667 944 ntBASIC16.48■□□□□ 0.23
Sox3P53784 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sox3P53784 Gm17661-201ENSMUST00000170317 270 ntBASIC16.48■□□□□ 0.23
Sox3P53784 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sox3P53784 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox3P53784 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox3P53784 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox3P53784 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Sox3P53784 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox3P53784 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sox3P53784 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sox3P53784 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox3P53784 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.48■□□□□ 0.23
Sox3P53784 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Sox3P53784 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox3P53784 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox3P53784 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sox3P53784 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Sox3P53784 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox3P53784 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox3P53784 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox3P53784 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox3P53784 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox3P53784 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Sox3P53784 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.47■□□□□ 0.23
Sox3P53784 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Sox3P53784 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox3P53784 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms