Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lbx1P52955 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Lbx1P52955 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lbx1P52955 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lbx1P52955 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
Lbx1P52955 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.66■□□□□ 0.26
Lbx1P52955 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.66■□□□□ 0.26
Lbx1P52955 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.66■□□□□ 0.26
Lbx1P52955 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.66■□□□□ 0.26
Lbx1P52955 Mir6956-201ENSMUST00000183598 62 ntBASIC16.66■□□□□ 0.26
Lbx1P52955 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.66■□□□□ 0.26
Lbx1P52955 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lbx1P52955 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lbx1P52955 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lbx1P52955 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.66■□□□□ 0.26
Lbx1P52955 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lbx1P52955 Gm15590-201ENSMUST00000078419 552 ntBASIC16.66■□□□□ 0.26
Lbx1P52955 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.66■□□□□ 0.26
Lbx1P52955 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lbx1P52955 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lbx1P52955 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lbx1P52955 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lbx1P52955 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lbx1P52955 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.65■□□□□ 0.26
Lbx1P52955 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lbx1P52955 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lbx1P52955 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lbx1P52955 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Lbx1P52955 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lbx1P52955 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lbx1P52955 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.65■□□□□ 0.26
Lbx1P52955 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lbx1P52955 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lbx1P52955 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.65■□□□□ 0.26
Lbx1P52955 Gm37025-201ENSMUST00000195159 829 ntBASIC16.65■□□□□ 0.26
Lbx1P52955 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.65■□□□□ 0.26
Lbx1P52955 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.65■□□□□ 0.26
Lbx1P52955 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lbx1P52955 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.65■□□□□ 0.26
Lbx1P52955 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lbx1P52955 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Lbx1P52955 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lbx1P52955 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lbx1P52955 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Lbx1P52955 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Lbx1P52955 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lbx1P52955 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Lbx1P52955 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lbx1P52955 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
Lbx1P52955 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lbx1P52955 Gm14140-201ENSMUST00000119999 995 ntBASIC16.64■□□□□ 0.25
Lbx1P52955 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.64■□□□□ 0.25
Lbx1P52955 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.64■□□□□ 0.25
Lbx1P52955 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Lbx1P52955 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lbx1P52955 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.64■□□□□ 0.25
Lbx1P52955 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lbx1P52955 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lbx1P52955 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lbx1P52955 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lbx1P52955 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lbx1P52955 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lbx1P52955 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lbx1P52955 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lbx1P52955 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lbx1P52955 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lbx1P52955 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lbx1P52955 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Lbx1P52955 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lbx1P52955 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.63■□□□□ 0.25
Lbx1P52955 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.63■□□□□ 0.25
Lbx1P52955 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lbx1P52955 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lbx1P52955 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lbx1P52955 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lbx1P52955 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lbx1P52955 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lbx1P52955 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Lbx1P52955 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lbx1P52955 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Lbx1P52955 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Lbx1P52955 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lbx1P52955 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lbx1P52955 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lbx1P52955 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.62■□□□□ 0.25
Lbx1P52955 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lbx1P52955 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lbx1P52955 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lbx1P52955 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lbx1P52955 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lbx1P52955 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Lbx1P52955 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Lbx1P52955 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lbx1P52955 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lbx1P52955 Chchd1-203ENSMUST00000224633 557 ntBASIC16.62■□□□□ 0.25
Lbx1P52955 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lbx1P52955 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.62■□□□□ 0.25
Lbx1P52955 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.62■□□□□ 0.25
Lbx1P52955 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.62■□□□□ 0.25
Lbx1P52955 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms