Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Xcl1P47993 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC11.32□□□□□ -0.6
Xcl1P47993 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC11.32□□□□□ -0.6
Xcl1P47993 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC11.32□□□□□ -0.6
Xcl1P47993 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Xcl1P47993 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.32□□□□□ -0.6
Xcl1P47993 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Xcl1P47993 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Xcl1P47993 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.32□□□□□ -0.6
Xcl1P47993 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xcl1P47993 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Xcl1P47993 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Xcl1P47993 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.31□□□□□ -0.6
Xcl1P47993 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Xcl1P47993 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Xcl1P47993 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Xcl1P47993 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Xcl1P47993 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Xcl1P47993 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Xcl1P47993 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Xcl1P47993 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Xcl1P47993 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Xcl1P47993 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Xcl1P47993 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Xcl1P47993 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Xcl1P47993 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Xcl1P47993 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Xcl1P47993 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Xcl1P47993 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Xcl1P47993 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Xcl1P47993 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Xcl1P47993 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Xcl1P47993 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Xcl1P47993 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Xcl1P47993 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Xcl1P47993 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Xcl1P47993 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Xcl1P47993 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Xcl1P47993 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Xcl1P47993 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Xcl1P47993 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Xcl1P47993 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Xcl1P47993 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC11.3□□□□□ -0.6
Xcl1P47993 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Xcl1P47993 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Xcl1P47993 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Xcl1P47993 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC11.3□□□□□ -0.6
Xcl1P47993 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Xcl1P47993 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Xcl1P47993 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Xcl1P47993 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Xcl1P47993 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Xcl1P47993 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Xcl1P47993 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Xcl1P47993 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Xcl1P47993 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Xcl1P47993 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Xcl1P47993 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Xcl1P47993 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Xcl1P47993 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Xcl1P47993 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Xcl1P47993 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Xcl1P47993 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Xcl1P47993 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Xcl1P47993 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Xcl1P47993 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Xcl1P47993 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Xcl1P47993 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Xcl1P47993 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Xcl1P47993 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Xcl1P47993 Gm11599-201ENSMUST00000118720 878 ntBASIC11.29□□□□□ -0.6
Xcl1P47993 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Xcl1P47993 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC11.29□□□□□ -0.6
Xcl1P47993 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Xcl1P47993 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Xcl1P47993 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Xcl1P47993 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC11.29□□□□□ -0.6
Xcl1P47993 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Xcl1P47993 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Xcl1P47993 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Xcl1P47993 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.29□□□□□ -0.6
Xcl1P47993 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Xcl1P47993 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Xcl1P47993 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Xcl1P47993 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Xcl1P47993 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms