Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-6P43688 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-6P43688 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-6P43688 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.31■□□□□ 0.2
Nkx2-6P43688 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Gm10819-201ENSMUST00000099988 561 ntBASIC16.31■□□□□ 0.2
Nkx2-6P43688 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-6P43688 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Gm17661-201ENSMUST00000170317 270 ntBASIC16.3■□□□□ 0.2
Nkx2-6P43688 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-6P43688 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-6P43688 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-6P43688 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-6P43688 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-6P43688 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Nkx2-6P43688 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nkx2-6P43688 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.29■□□□□ 0.2
Nkx2-6P43688 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.29■□□□□ 0.2
Nkx2-6P43688 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-6P43688 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-6P43688 Gm27389-201ENSMUST00000183622 195 ntBASIC16.29■□□□□ 0.2
Nkx2-6P43688 Gm21559-201ENSMUST00000220638 855 ntBASIC16.29■□□□□ 0.2
Nkx2-6P43688 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-6P43688 Gm8587-201ENSMUST00000076538 843 ntBASIC16.29■□□□□ 0.2
Nkx2-6P43688 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-6P43688 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-6P43688 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-6P43688 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-6P43688 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-6P43688 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-6P43688 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-6P43688 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-6P43688 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-6P43688 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-6P43688 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-6P43688 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Nkx2-6P43688 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-6P43688 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-6P43688 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-6P43688 Gm9013-201ENSMUST00000132939 882 ntBASIC16.28■□□□□ 0.2
Nkx2-6P43688 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-6P43688 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-6P43688 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Nkx2-6P43688 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-6P43688 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-6P43688 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-6P43688 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-6P43688 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-6P43688 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Nkx2-6P43688 Fst-202ENSMUST00000223640 2612 ntBASIC16.27■□□□□ 0.2
Nkx2-6P43688 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-6P43688 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Nkx2-6P43688 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-6P43688 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Nkx2-6P43688 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Nkx2-6P43688 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-6P43688 Gm5587-201ENSMUST00000206270 674 ntBASIC16.27■□□□□ 0.2
Nkx2-6P43688 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-6P43688 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms