Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Sox18P43680 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox18P43680 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox18P43680 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Sox18P43680 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox18P43680 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox18P43680 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox18P43680 Olfr129-201ENSMUST00000122318 993 ntBASIC16.51■□□□□ 0.23
Sox18P43680 Gm27525-201ENSMUST00000184465 107 ntBASIC16.51■□□□□ 0.23
Sox18P43680 Gm43347-201ENSMUST00000200226 580 ntBASIC16.51■□□□□ 0.23
Sox18P43680 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox18P43680 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox18P43680 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox18P43680 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Sox18P43680 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Sox18P43680 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox18P43680 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Sox18P43680 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox18P43680 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox18P43680 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox18P43680 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sox18P43680 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox18P43680 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox18P43680 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sox18P43680 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.5■□□□□ 0.23
Sox18P43680 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.5■□□□□ 0.23
Sox18P43680 Gm18206-201ENSMUST00000207027 926 ntBASIC16.5■□□□□ 0.23
Sox18P43680 Gm9731-201ENSMUST00000209480 747 ntBASIC16.5■□□□□ 0.23
Sox18P43680 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox18P43680 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox18P43680 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox18P43680 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox18P43680 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sox18P43680 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sox18P43680 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox18P43680 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox18P43680 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
Sox18P43680 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox18P43680 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Sox18P43680 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox18P43680 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox18P43680 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox18P43680 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox18P43680 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.49■□□□□ 0.23
Sox18P43680 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox18P43680 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Sox18P43680 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox18P43680 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox18P43680 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox18P43680 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox18P43680 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox18P43680 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox18P43680 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox18P43680 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Sox18P43680 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Sox18P43680 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox18P43680 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sox18P43680 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox18P43680 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Sox18P43680 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sox18P43680 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Sox18P43680 Gm37722-201ENSMUST00000193757 208 ntBASIC16.48■□□□□ 0.23
Sox18P43680 Gm18195-201ENSMUST00000207604 706 ntBASIC16.48■□□□□ 0.23
Sox18P43680 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sox18P43680 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox18P43680 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sox18P43680 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Sox18P43680 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox18P43680 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox18P43680 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox18P43680 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox18P43680 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox18P43680 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Sox18P43680 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Sox18P43680 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Sox18P43680 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox18P43680 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Sox18P43680 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sox18P43680 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.47■□□□□ 0.23
Sox18P43680 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sox18P43680 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Sox18P43680 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox18P43680 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox18P43680 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.47■□□□□ 0.23
Sox18P43680 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox18P43680 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sox18P43680 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox18P43680 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox18P43680 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox18P43680 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sox18P43680 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox18P43680 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.46■□□□□ 0.23
Sox18P43680 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Sox18P43680 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox18P43680 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sox18P43680 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox18P43680 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sox18P43680 Gm13401-201ENSMUST00000117074 291 ntBASIC16.46■□□□□ 0.23
Sox18P43680 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox18P43680 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms