Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.31□□□□□ -0.12
Abca1P41233 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abca1P41233 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abca1P41233 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abca1P41233 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abca1P41233 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abca1P41233 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.31□□□□□ -0.12
Abca1P41233 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Abca1P41233 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abca1P41233 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abca1P41233 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abca1P41233 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abca1P41233 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abca1P41233 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abca1P41233 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Abca1P41233 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abca1P41233 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abca1P41233 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abca1P41233 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abca1P41233 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abca1P41233 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.3□□□□□ -0.12
Abca1P41233 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abca1P41233 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.3□□□□□ -0.12
Abca1P41233 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.3□□□□□ -0.12
Abca1P41233 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abca1P41233 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.3□□□□□ -0.12
Abca1P41233 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abca1P41233 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abca1P41233 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abca1P41233 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abca1P41233 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.3□□□□□ -0.12
Abca1P41233 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Abca1P41233 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abca1P41233 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Abca1P41233 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.3□□□□□ -0.12
Abca1P41233 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abca1P41233 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abca1P41233 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Abca1P41233 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Abca1P41233 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Abca1P41233 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Abca1P41233 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.29□□□□□ -0.12
Abca1P41233 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Abca1P41233 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Abca1P41233 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Abca1P41233 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abca1P41233 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.29□□□□□ -0.12
Abca1P41233 Gm17807-201ENSMUST00000186869 298 ntBASIC14.29□□□□□ -0.12
Abca1P41233 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Abca1P41233 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Abca1P41233 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Abca1P41233 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Abca1P41233 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Abca1P41233 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Abca1P41233 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Abca1P41233 Gm44771-201ENSMUST00000206975 626 ntBASIC14.28□□□□□ -0.12
Abca1P41233 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Abca1P41233 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Abca1P41233 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Abca1P41233 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Abca1P41233 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Abca1P41233 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Abca1P41233 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Abca1P41233 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Abca1P41233 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Abca1P41233 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Abca1P41233 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Abca1P41233 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.27□□□□□ -0.12
Abca1P41233 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.27□□□□□ -0.12
Abca1P41233 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Abca1P41233 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Abca1P41233 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.27□□□□□ -0.12
Abca1P41233 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.27□□□□□ -0.12
Abca1P41233 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Abca1P41233 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Abca1P41233 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Abca1P41233 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Abca1P41233 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.27□□□□□ -0.13
Abca1P41233 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Abca1P41233 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Abca1P41233 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Abca1P41233 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Abca1P41233 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Abca1P41233 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Abca1P41233 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Abca1P41233 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Abca1P41233 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.26□□□□□ -0.13
Abca1P41233 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Abca1P41233 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.26□□□□□ -0.13
Abca1P41233 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.26□□□□□ -0.13
Abca1P41233 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Abca1P41233 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Abca1P41233 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Abca1P41233 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.26□□□□□ -0.13
Abca1P41233 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Abca1P41233 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Abca1P41233 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Abca1P41233 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Abca1P41233 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Abca1P41233 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms