Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox6P40645 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox6P40645 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox6P40645 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Sox6P40645 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sox6P40645 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.22■□□□□ 0.19
Sox6P40645 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sox6P40645 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox6P40645 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox6P40645 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox6P40645 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox6P40645 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.22■□□□□ 0.19
Sox6P40645 Gm2399-201ENSMUST00000104944 225 ntBASIC16.22■□□□□ 0.19
Sox6P40645 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.22■□□□□ 0.19
Sox6P40645 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.22■□□□□ 0.19
Sox6P40645 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox6P40645 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sox6P40645 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox6P40645 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Sox6P40645 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox6P40645 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox6P40645 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox6P40645 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox6P40645 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox6P40645 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox6P40645 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox6P40645 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox6P40645 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox6P40645 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
Sox6P40645 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Sox6P40645 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox6P40645 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox6P40645 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sox6P40645 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox6P40645 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Sox6P40645 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.21■□□□□ 0.19
Sox6P40645 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.21■□□□□ 0.19
Sox6P40645 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.21■□□□□ 0.19
Sox6P40645 Gm2559-201ENSMUST00000201323 363 ntBASIC16.21■□□□□ 0.19
Sox6P40645 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox6P40645 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Sox6P40645 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox6P40645 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sox6P40645 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.21■□□□□ 0.19
Sox6P40645 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Sox6P40645 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.21■□□□□ 0.19
Sox6P40645 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox6P40645 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox6P40645 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox6P40645 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox6P40645 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sox6P40645 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox6P40645 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Sox6P40645 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sox6P40645 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox6P40645 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox6P40645 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox6P40645 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox6P40645 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sox6P40645 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sox6P40645 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.2■□□□□ 0.18
Sox6P40645 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sox6P40645 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.2■□□□□ 0.18
Sox6P40645 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.2■□□□□ 0.18
Sox6P40645 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.2■□□□□ 0.18
Sox6P40645 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox6P40645 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox6P40645 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox6P40645 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sox6P40645 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.2■□□□□ 0.18
Sox6P40645 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Sox6P40645 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox6P40645 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox6P40645 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sox6P40645 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Sox6P40645 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox6P40645 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.19■□□□□ 0.18
Sox6P40645 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Sox6P40645 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.19■□□□□ 0.18
Sox6P40645 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox6P40645 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox6P40645 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox6P40645 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox6P40645 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox6P40645 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox6P40645 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Sox6P40645 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox6P40645 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.19■□□□□ 0.18
Sox6P40645 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.19■□□□□ 0.18
Sox6P40645 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.19■□□□□ 0.18
Sox6P40645 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sox6P40645 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sox6P40645 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.19■□□□□ 0.18
Sox6P40645 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox6P40645 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox6P40645 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox6P40645 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Sox6P40645 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox6P40645 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sox6P40645 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms