Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkn1aP39689 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkn1aP39689 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkn1aP39689 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkn1aP39689 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.25□□□□□ -0.13
Cdkn1aP39689 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkn1aP39689 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkn1aP39689 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkn1aP39689 Gm16061-201ENSMUST00000122167 857 ntBASIC14.25□□□□□ -0.13
Cdkn1aP39689 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.25□□□□□ -0.13
Cdkn1aP39689 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Cdkn1aP39689 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.25□□□□□ -0.13
Cdkn1aP39689 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.25□□□□□ -0.13
Cdkn1aP39689 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cdkn1aP39689 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkn1aP39689 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Cdkn1aP39689 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkn1aP39689 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkn1aP39689 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkn1aP39689 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkn1aP39689 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkn1aP39689 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn1aP39689 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn1aP39689 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn1aP39689 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn1aP39689 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn1aP39689 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cdkn1aP39689 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn1aP39689 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn1aP39689 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn1aP39689 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn1aP39689 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.24□□□□□ -0.13
Cdkn1aP39689 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.24□□□□□ -0.13
Cdkn1aP39689 Il3ra-202ENSMUST00000223589 738 ntBASIC14.24□□□□□ -0.13
Cdkn1aP39689 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn1aP39689 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn1aP39689 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn1aP39689 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn1aP39689 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn1aP39689 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn1aP39689 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cdkn1aP39689 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn1aP39689 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkn1aP39689 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cdkn1aP39689 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Cdkn1aP39689 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cdkn1aP39689 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn1aP39689 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn1aP39689 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cdkn1aP39689 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cdkn1aP39689 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn1aP39689 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn1aP39689 Gm17661-201ENSMUST00000170317 270 ntBASIC14.23□□□□□ -0.13
Cdkn1aP39689 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.23□□□□□ -0.13
Cdkn1aP39689 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdkn1aP39689 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.23□□□□□ -0.13
Cdkn1aP39689 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Cdkn1aP39689 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn1aP39689 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn1aP39689 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cdkn1aP39689 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn1aP39689 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn1aP39689 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn1aP39689 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn1aP39689 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkn1aP39689 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn1aP39689 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.22□□□□□ -0.13
Cdkn1aP39689 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn1aP39689 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn1aP39689 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn1aP39689 Gm10013-201ENSMUST00000106074 672 ntBASIC14.22□□□□□ -0.13
Cdkn1aP39689 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn1aP39689 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cdkn1aP39689 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn1aP39689 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.22□□□□□ -0.13
Cdkn1aP39689 Gm6659-201ENSMUST00000174752 547 ntBASIC14.22□□□□□ -0.13
Cdkn1aP39689 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.22□□□□□ -0.13
Cdkn1aP39689 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn1aP39689 Gm18032-201ENSMUST00000222541 538 ntBASIC14.22□□□□□ -0.13
Cdkn1aP39689 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.22□□□□□ -0.13
Cdkn1aP39689 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn1aP39689 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn1aP39689 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn1aP39689 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkn1aP39689 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdkn1aP39689 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdkn1aP39689 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cdkn1aP39689 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdkn1aP39689 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdkn1aP39689 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdkn1aP39689 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdkn1aP39689 Gm13474-201ENSMUST00000122466 815 ntBASIC14.21□□□□□ -0.13
Cdkn1aP39689 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cdkn1aP39689 Gm22697-201ENSMUST00000175194 63 ntBASIC14.21□□□□□ -0.13
Cdkn1aP39689 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.21□□□□□ -0.13
Cdkn1aP39689 Gm18101-201ENSMUST00000215769 548 ntBASIC14.21□□□□□ -0.13
Cdkn1aP39689 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.21□□□□□ -0.13
Cdkn1aP39689 Gm7370-201ENSMUST00000219471 767 ntBASIC14.21□□□□□ -0.13
Cdkn1aP39689 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Cdkn1aP39689 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms