Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LdlrP35951 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LdlrP35951 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LdlrP35951 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LdlrP35951 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.19■□□□□ 0.34
LdlrP35951 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LdlrP35951 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LdlrP35951 Gm12896-201ENSMUST00000118430 226 ntBASIC17.19■□□□□ 0.34
LdlrP35951 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LdlrP35951 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.19■□□□□ 0.34
LdlrP35951 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.19■□□□□ 0.34
LdlrP35951 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LdlrP35951 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LdlrP35951 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LdlrP35951 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LdlrP35951 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LdlrP35951 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LdlrP35951 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LdlrP35951 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.19■□□□□ 0.34
LdlrP35951 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LdlrP35951 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LdlrP35951 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LdlrP35951 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.18■□□□□ 0.34
LdlrP35951 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.18■□□□□ 0.34
LdlrP35951 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LdlrP35951 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LdlrP35951 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LdlrP35951 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LdlrP35951 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
LdlrP35951 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LdlrP35951 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LdlrP35951 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LdlrP35951 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LdlrP35951 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LdlrP35951 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LdlrP35951 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.18■□□□□ 0.34
LdlrP35951 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LdlrP35951 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LdlrP35951 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LdlrP35951 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.18■□□□□ 0.34
LdlrP35951 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LdlrP35951 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LdlrP35951 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LdlrP35951 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
LdlrP35951 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.17■□□□□ 0.34
LdlrP35951 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LdlrP35951 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LdlrP35951 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LdlrP35951 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LdlrP35951 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LdlrP35951 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.17■□□□□ 0.34
LdlrP35951 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LdlrP35951 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LdlrP35951 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LdlrP35951 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LdlrP35951 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LdlrP35951 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LdlrP35951 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LdlrP35951 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.16■□□□□ 0.34
LdlrP35951 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.16■□□□□ 0.34
LdlrP35951 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.16■□□□□ 0.34
LdlrP35951 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LdlrP35951 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LdlrP35951 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LdlrP35951 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LdlrP35951 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LdlrP35951 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LdlrP35951 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LdlrP35951 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LdlrP35951 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.15■□□□□ 0.34
LdlrP35951 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
LdlrP35951 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LdlrP35951 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LdlrP35951 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LdlrP35951 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LdlrP35951 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LdlrP35951 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LdlrP35951 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
LdlrP35951 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LdlrP35951 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LdlrP35951 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LdlrP35951 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LdlrP35951 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LdlrP35951 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.15■□□□□ 0.34
LdlrP35951 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LdlrP35951 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LdlrP35951 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LdlrP35951 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
LdlrP35951 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
LdlrP35951 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LdlrP35951 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LdlrP35951 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LdlrP35951 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LdlrP35951 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LdlrP35951 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LdlrP35951 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LdlrP35951 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LdlrP35951 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LdlrP35951 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LdlrP35951 Gm10418-201ENSMUST00000100943 576 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms