Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rom1P32958 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rom1P32958 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rom1P32958 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rom1P32958 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rom1P32958 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rom1P32958 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rom1P32958 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rom1P32958 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rom1P32958 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rom1P32958 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rom1P32958 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rom1P32958 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rom1P32958 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rom1P32958 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rom1P32958 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rom1P32958 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rom1P32958 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rom1P32958 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.69□□□□□ -0.22
Rom1P32958 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rom1P32958 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rom1P32958 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rom1P32958 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rom1P32958 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rom1P32958 Gm12821-201ENSMUST00000120022 600 ntBASIC13.69□□□□□ -0.22
Rom1P32958 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rom1P32958 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rom1P32958 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rom1P32958 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rom1P32958 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.69□□□□□ -0.22
Rom1P32958 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rom1P32958 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rom1P32958 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Rom1P32958 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rom1P32958 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rom1P32958 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.68□□□□□ -0.22
Rom1P32958 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rom1P32958 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rom1P32958 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rom1P32958 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rom1P32958 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.68□□□□□ -0.22
Rom1P32958 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC13.68□□□□□ -0.22
Rom1P32958 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.68□□□□□ -0.22
Rom1P32958 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rom1P32958 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.68□□□□□ -0.22
Rom1P32958 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rom1P32958 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rom1P32958 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rom1P32958 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rom1P32958 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rom1P32958 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rom1P32958 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rom1P32958 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rom1P32958 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rom1P32958 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rom1P32958 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rom1P32958 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rom1P32958 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rom1P32958 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Rom1P32958 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.67□□□□□ -0.22
Rom1P32958 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.67□□□□□ -0.22
Rom1P32958 Gm6139-201ENSMUST00000079261 882 ntBASIC13.67□□□□□ -0.22
Rom1P32958 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rom1P32958 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rom1P32958 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rom1P32958 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rom1P32958 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rom1P32958 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rom1P32958 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rom1P32958 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rom1P32958 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rom1P32958 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rom1P32958 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rom1P32958 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Rom1P32958 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rom1P32958 Reep4-203ENSMUST00000226563 1444 ntBASIC13.66□□□□□ -0.22
Rom1P32958 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rom1P32958 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rom1P32958 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rom1P32958 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rom1P32958 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rom1P32958 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rom1P32958 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rom1P32958 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rom1P32958 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rom1P32958 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rom1P32958 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC13.66□□□□□ -0.22
Rom1P32958 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rom1P32958 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rom1P32958 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rom1P32958 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rom1P32958 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rom1P32958 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.66□□□□□ -0.22
Rom1P32958 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rom1P32958 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rom1P32958 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Rom1P32958 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rom1P32958 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rom1P32958 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rom1P32958 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms