Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a1P31648 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Slc6a1P31648 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a1P31648 Gm12933-201ENSMUST00000120203 872 ntBASIC14.86□□□□□ -0.03
Slc6a1P31648 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a1P31648 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.86□□□□□ -0.03
Slc6a1P31648 Gm37179-201ENSMUST00000194862 823 ntBASIC14.86□□□□□ -0.03
Slc6a1P31648 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a1P31648 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a1P31648 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Slc6a1P31648 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a1P31648 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a1P31648 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.86□□□□□ -0.03
Slc6a1P31648 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Slc6a1P31648 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a1P31648 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.86□□□□□ -0.03
Slc6a1P31648 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a1P31648 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Slc6a1P31648 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a1P31648 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a1P31648 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a1P31648 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Slc6a1P31648 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a1P31648 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a1P31648 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.85□□□□□ -0.03
Slc6a1P31648 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Slc6a1P31648 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a1P31648 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a1P31648 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a1P31648 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a1P31648 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.85□□□□□ -0.03
Slc6a1P31648 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a1P31648 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a1P31648 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a1P31648 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a1P31648 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a1P31648 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Slc6a1P31648 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.85□□□□□ -0.03
Slc6a1P31648 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a1P31648 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a1P31648 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a1P31648 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a1P31648 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a1P31648 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.85□□□□□ -0.03
Slc6a1P31648 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a1P31648 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Slc6a1P31648 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a1P31648 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a1P31648 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Slc6a1P31648 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a1P31648 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.84□□□□□ -0.03
Slc6a1P31648 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Slc6a1P31648 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a1P31648 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.84□□□□□ -0.03
Slc6a1P31648 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.84□□□□□ -0.03
Slc6a1P31648 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.84□□□□□ -0.03
Slc6a1P31648 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.84□□□□□ -0.03
Slc6a1P31648 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a1P31648 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a1P31648 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a1P31648 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a1P31648 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a1P31648 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Slc6a1P31648 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a1P31648 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Slc6a1P31648 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a1P31648 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a1P31648 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Slc6a1P31648 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a1P31648 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Slc6a1P31648 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a1P31648 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a1P31648 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Slc6a1P31648 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a1P31648 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Slc6a1P31648 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Slc6a1P31648 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Slc6a1P31648 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Slc6a1P31648 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Slc6a1P31648 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Slc6a1P31648 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a1P31648 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a1P31648 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a1P31648 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.83□□□□□ -0.04
Slc6a1P31648 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.83□□□□□ -0.04
Slc6a1P31648 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a1P31648 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Slc6a1P31648 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a1P31648 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a1P31648 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Slc6a1P31648 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a1P31648 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a1P31648 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.83□□□□□ -0.04
Slc6a1P31648 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a1P31648 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a1P31648 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a1P31648 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a1P31648 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a1P31648 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms