Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Nckap1P28660 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nckap1P28660 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nckap1P28660 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nckap1P28660 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nckap1P28660 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nckap1P28660 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nckap1P28660 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.18■□□□□ 0.34
Nckap1P28660 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Nckap1P28660 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nckap1P28660 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.18■□□□□ 0.34
Nckap1P28660 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nckap1P28660 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nckap1P28660 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.18■□□□□ 0.34
Nckap1P28660 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nckap1P28660 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nckap1P28660 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nckap1P28660 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nckap1P28660 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.18■□□□□ 0.34
Nckap1P28660 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Nckap1P28660 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nckap1P28660 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nckap1P28660 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nckap1P28660 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nckap1P28660 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nckap1P28660 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Nckap1P28660 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.18■□□□□ 0.34
Nckap1P28660 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nckap1P28660 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nckap1P28660 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Nckap1P28660 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nckap1P28660 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nckap1P28660 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Nckap1P28660 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.17■□□□□ 0.34
Nckap1P28660 Gm14859-201ENSMUST00000117752 357 ntBASIC17.17■□□□□ 0.34
Nckap1P28660 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nckap1P28660 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nckap1P28660 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Nckap1P28660 Mir1668-201ENSMUST00000184114 107 ntBASIC17.17■□□□□ 0.34
Nckap1P28660 Gm7370-201ENSMUST00000219471 767 ntBASIC17.17■□□□□ 0.34
Nckap1P28660 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nckap1P28660 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nckap1P28660 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nckap1P28660 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nckap1P28660 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nckap1P28660 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nckap1P28660 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nckap1P28660 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Nckap1P28660 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nckap1P28660 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nckap1P28660 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nckap1P28660 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.16■□□□□ 0.34
Nckap1P28660 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Nckap1P28660 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Nckap1P28660 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.16■□□□□ 0.34
Nckap1P28660 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nckap1P28660 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nckap1P28660 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nckap1P28660 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Nckap1P28660 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nckap1P28660 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nckap1P28660 Gm17661-201ENSMUST00000170317 270 ntBASIC17.16■□□□□ 0.34
Nckap1P28660 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.16■□□□□ 0.34
Nckap1P28660 Gm21559-201ENSMUST00000220638 855 ntBASIC17.16■□□□□ 0.34
Nckap1P28660 Gm8587-201ENSMUST00000076538 843 ntBASIC17.16■□□□□ 0.34
Nckap1P28660 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Nckap1P28660 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nckap1P28660 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nckap1P28660 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nckap1P28660 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nckap1P28660 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.15■□□□□ 0.34
Nckap1P28660 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nckap1P28660 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nckap1P28660 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nckap1P28660 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nckap1P28660 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nckap1P28660 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.15■□□□□ 0.34
Nckap1P28660 Gm7213-201ENSMUST00000215977 950 ntBASIC17.15■□□□□ 0.34
Nckap1P28660 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nckap1P28660 Gm10819-201ENSMUST00000099988 561 ntBASIC17.15■□□□□ 0.34
Nckap1P28660 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nckap1P28660 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nckap1P28660 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nckap1P28660 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nckap1P28660 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nckap1P28660 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Nckap1P28660 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Nckap1P28660 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nckap1P28660 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nckap1P28660 Idnk-204ENSMUST00000226010 1898 ntBASIC17.14■□□□□ 0.33
Nckap1P28660 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nckap1P28660 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nckap1P28660 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Nckap1P28660 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nckap1P28660 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Nckap1P28660 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nckap1P28660 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nckap1P28660 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nckap1P28660 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Nckap1P28660 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms