Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nfkb1P25799 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.75■□□□□ 0.43
Nfkb1P25799 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.75■□□□□ 0.43
Nfkb1P25799 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nfkb1P25799 Il3ra-202ENSMUST00000223589 738 ntBASIC17.75■□□□□ 0.43
Nfkb1P25799 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nfkb1P25799 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nfkb1P25799 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Nfkb1P25799 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nfkb1P25799 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nfkb1P25799 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Nfkb1P25799 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nfkb1P25799 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Nfkb1P25799 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nfkb1P25799 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nfkb1P25799 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nfkb1P25799 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.74■□□□□ 0.43
Nfkb1P25799 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nfkb1P25799 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nfkb1P25799 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nfkb1P25799 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nfkb1P25799 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nfkb1P25799 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nfkb1P25799 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nfkb1P25799 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nfkb1P25799 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nfkb1P25799 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Nfkb1P25799 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nfkb1P25799 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Nfkb1P25799 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nfkb1P25799 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.73■□□□□ 0.43
Nfkb1P25799 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nfkb1P25799 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nfkb1P25799 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nfkb1P25799 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nfkb1P25799 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nfkb1P25799 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.73■□□□□ 0.43
Nfkb1P25799 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nfkb1P25799 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nfkb1P25799 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nfkb1P25799 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nfkb1P25799 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nfkb1P25799 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nfkb1P25799 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nfkb1P25799 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Nfkb1P25799 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nfkb1P25799 AA414768-201ENSMUST00000121924 1257 ntBASIC17.72■□□□□ 0.43
Nfkb1P25799 Gm13474-201ENSMUST00000122466 815 ntBASIC17.72■□□□□ 0.43
Nfkb1P25799 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nfkb1P25799 Mir8112-201ENSMUST00000184382 131 ntBASIC17.72■□□□□ 0.43
Nfkb1P25799 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.72■□□□□ 0.43
Nfkb1P25799 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nfkb1P25799 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nfkb1P25799 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Nfkb1P25799 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nfkb1P25799 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nfkb1P25799 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
Nfkb1P25799 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nfkb1P25799 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nfkb1P25799 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nfkb1P25799 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nfkb1P25799 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Nfkb1P25799 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nfkb1P25799 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfkb1P25799 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfkb1P25799 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfkb1P25799 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfkb1P25799 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfkb1P25799 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Nfkb1P25799 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Nfkb1P25799 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Nfkb1P25799 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfkb1P25799 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Nfkb1P25799 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Nfkb1P25799 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfkb1P25799 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfkb1P25799 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfkb1P25799 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfkb1P25799 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfkb1P25799 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Nfkb1P25799 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Nfkb1P25799 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfkb1P25799 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Nfkb1P25799 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nfkb1P25799 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfkb1P25799 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfkb1P25799 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nfkb1P25799 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfkb1P25799 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfkb1P25799 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfkb1P25799 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfkb1P25799 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfkb1P25799 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfkb1P25799 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.7■□□□□ 0.42
Nfkb1P25799 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nfkb1P25799 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.7■□□□□ 0.42
Nfkb1P25799 Gm17661-201ENSMUST00000170317 270 ntBASIC17.7■□□□□ 0.42
Nfkb1P25799 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nfkb1P25799 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfkb1P25799 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms