Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col8a2P25318 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col8a2P25318 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col8a2P25318 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Col8a2P25318 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.41□□□□□ -0.1
Col8a2P25318 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.41□□□□□ -0.1
Col8a2P25318 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Col8a2P25318 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.41□□□□□ -0.1
Col8a2P25318 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.41□□□□□ -0.1
Col8a2P25318 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col8a2P25318 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col8a2P25318 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col8a2P25318 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col8a2P25318 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col8a2P25318 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.41□□□□□ -0.1
Col8a2P25318 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.41□□□□□ -0.1
Col8a2P25318 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col8a2P25318 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.41□□□□□ -0.1
Col8a2P25318 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Col8a2P25318 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col8a2P25318 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col8a2P25318 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col8a2P25318 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.4□□□□□ -0.1
Col8a2P25318 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col8a2P25318 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Col8a2P25318 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Col8a2P25318 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col8a2P25318 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col8a2P25318 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col8a2P25318 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.4□□□□□ -0.1
Col8a2P25318 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.4□□□□□ -0.1
Col8a2P25318 Gm27463-201ENSMUST00000183569 57 ntBASIC14.4□□□□□ -0.1
Col8a2P25318 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col8a2P25318 Gm18959-201ENSMUST00000208954 655 ntBASIC14.4□□□□□ -0.1
Col8a2P25318 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
Col8a2P25318 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col8a2P25318 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col8a2P25318 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col8a2P25318 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col8a2P25318 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Col8a2P25318 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col8a2P25318 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col8a2P25318 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.39□□□□□ -0.11
Col8a2P25318 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.39□□□□□ -0.11
Col8a2P25318 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col8a2P25318 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.39□□□□□ -0.11
Col8a2P25318 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col8a2P25318 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.39□□□□□ -0.11
Col8a2P25318 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Col8a2P25318 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Col8a2P25318 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col8a2P25318 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Col8a2P25318 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col8a2P25318 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Col8a2P25318 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col8a2P25318 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col8a2P25318 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.38□□□□□ -0.11
Col8a2P25318 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col8a2P25318 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col8a2P25318 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col8a2P25318 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col8a2P25318 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col8a2P25318 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.38□□□□□ -0.11
Col8a2P25318 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Col8a2P25318 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col8a2P25318 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col8a2P25318 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.38□□□□□ -0.11
Col8a2P25318 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.38□□□□□ -0.11
Col8a2P25318 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.38□□□□□ -0.11
Col8a2P25318 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col8a2P25318 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col8a2P25318 Gm10566-201ENSMUST00000086739 996 ntBASIC14.38□□□□□ -0.11
Col8a2P25318 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col8a2P25318 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col8a2P25318 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col8a2P25318 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col8a2P25318 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col8a2P25318 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Col8a2P25318 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Col8a2P25318 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col8a2P25318 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col8a2P25318 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.37□□□□□ -0.11
Col8a2P25318 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col8a2P25318 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col8a2P25318 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col8a2P25318 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col8a2P25318 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col8a2P25318 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col8a2P25318 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col8a2P25318 Mir5130-201ENSMUST00000175160 84 ntBASIC14.37□□□□□ -0.11
Col8a2P25318 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.37□□□□□ -0.11
Col8a2P25318 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col8a2P25318 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.37□□□□□ -0.11
Col8a2P25318 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col8a2P25318 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col8a2P25318 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col8a2P25318 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col8a2P25318 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col8a2P25318 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col8a2P25318 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms