Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UbbP0CG49 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UbbP0CG49 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UbbP0CG49 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
UbbP0CG49 Gm2399-201ENSMUST00000104944 225 ntBASIC15.03■□□□□ -0
UbbP0CG49 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
UbbP0CG49 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.03■□□□□ -0
UbbP0CG49 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
UbbP0CG49 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.03■□□□□ -0
UbbP0CG49 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UbbP0CG49 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UbbP0CG49 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.03■□□□□ -0
UbbP0CG49 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UbbP0CG49 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UbbP0CG49 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UbbP0CG49 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.02■□□□□ -0
UbbP0CG49 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UbbP0CG49 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UbbP0CG49 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.02■□□□□ -0
UbbP0CG49 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
UbbP0CG49 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.02■□□□□ -0
UbbP0CG49 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.02■□□□□ -0
UbbP0CG49 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
UbbP0CG49 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
UbbP0CG49 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
UbbP0CG49 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
UbbP0CG49 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UbbP0CG49 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UbbP0CG49 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
UbbP0CG49 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
UbbP0CG49 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
UbbP0CG49 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
UbbP0CG49 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
UbbP0CG49 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UbbP0CG49 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
UbbP0CG49 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UbbP0CG49 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UbbP0CG49 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UbbP0CG49 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
UbbP0CG49 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
UbbP0CG49 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UbbP0CG49 Gm7290-201ENSMUST00000104990 617 ntBASIC15.01□□□□□ -0.01
UbbP0CG49 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UbbP0CG49 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.01□□□□□ -0.01
UbbP0CG49 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UbbP0CG49 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.01□□□□□ -0.01
UbbP0CG49 Gm12918-201ENSMUST00000120234 636 ntBASIC15.01□□□□□ -0.01
UbbP0CG49 Gm15710-201ENSMUST00000121821 636 ntBASIC15.01□□□□□ -0.01
UbbP0CG49 Gm5075-201ENSMUST00000196916 622 ntBASIC15.01□□□□□ -0.01
UbbP0CG49 Gm42642-201ENSMUST00000200683 355 ntBASIC15.01□□□□□ -0.01
UbbP0CG49 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.01□□□□□ -0.01
UbbP0CG49 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.01□□□□□ -0.01
UbbP0CG49 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
UbbP0CG49 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UbbP0CG49 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UbbP0CG49 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UbbP0CG49 Dancr-204ENSMUST00000132389 2347 ntBASIC15.01□□□□□ -0.01
UbbP0CG49 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UbbP0CG49 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.01□□□□□ -0.01
UbbP0CG49 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UbbP0CG49 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
UbbP0CG49 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UbbP0CG49 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
UbbP0CG49 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UbbP0CG49 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UbbP0CG49 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
UbbP0CG49 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
UbbP0CG49 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UbbP0CG49 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UbbP0CG49 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UbbP0CG49 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15□□□□□ -0.01
UbbP0CG49 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UbbP0CG49 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15□□□□□ -0.01
UbbP0CG49 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UbbP0CG49 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15□□□□□ -0.01
UbbP0CG49 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15□□□□□ -0.01
UbbP0CG49 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UbbP0CG49 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UbbP0CG49 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UbbP0CG49 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15□□□□□ -0.01
UbbP0CG49 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UbbP0CG49 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15□□□□□ -0.01
UbbP0CG49 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
UbbP0CG49 Gm6365-201ENSMUST00000054711 744 ntBASIC15□□□□□ -0.01
UbbP0CG49 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
UbbP0CG49 Zfp783-201ENSMUST00000095946 670 ntBASIC15□□□□□ -0.01
UbbP0CG49 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UbbP0CG49 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
UbbP0CG49 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
UbbP0CG49 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15□□□□□ -0.01
UbbP0CG49 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
UbbP0CG49 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UbbP0CG49 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UbbP0CG49 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UbbP0CG49 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.99□□□□□ -0.01
UbbP0CG49 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.99□□□□□ -0.01
UbbP0CG49 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UbbP0CG49 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UbbP0CG49 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UbbP0CG49 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms