Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
P01878 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.81■□□□□ 0.44
P01878 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.81■□□□□ 0.44
P01878 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
P01878 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
P01878 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
P01878 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
P01878 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
P01878 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
P01878 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
P01878 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
P01878 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.8■□□□□ 0.44
P01878 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
P01878 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
P01878 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
P01878 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.8■□□□□ 0.44
P01878 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
P01878 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
P01878 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
P01878 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
P01878 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
P01878 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01878 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01878 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.79■□□□□ 0.44
P01878 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
P01878 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.79■□□□□ 0.44
P01878 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01878 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01878 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
P01878 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01878 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
P01878 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01878 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01878 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01878 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
P01878 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01878 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01878 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01878 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
P01878 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01878 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01878 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
P01878 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
P01878 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
P01878 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.78■□□□□ 0.44
P01878 Gm13186-201ENSMUST00000118031 316 ntBASIC17.78■□□□□ 0.44
P01878 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
P01878 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P01878 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P01878 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
P01878 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
P01878 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P01878 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
P01878 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.78■□□□□ 0.44
P01878 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P01878 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
P01878 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
P01878 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
P01878 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
P01878 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.77■□□□□ 0.44
P01878 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
P01878 Gm7153-201ENSMUST00000117092 455 ntBASIC17.77■□□□□ 0.44
P01878 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
P01878 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
P01878 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
P01878 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.77■□□□□ 0.44
P01878 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
P01878 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
P01878 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
P01878 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
P01878 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P01878 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
P01878 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.76■□□□□ 0.43
P01878 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
P01878 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P01878 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P01878 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P01878 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.76■□□□□ 0.43
P01878 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.76■□□□□ 0.43
P01878 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P01878 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.76■□□□□ 0.43
P01878 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
P01878 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.75■□□□□ 0.43
P01878 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01878 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01878 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
P01878 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P01878 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01878 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01878 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.75■□□□□ 0.43
P01878 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
P01878 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.75■□□□□ 0.43
P01878 Gm18115-201ENSMUST00000221209 621 ntBASIC17.75■□□□□ 0.43
P01878 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01878 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P01878 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01878 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01878 Phf7-203ENSMUST00000226565 1971 ntBASIC17.75■□□□□ 0.43
P01878 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01878 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms