Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.43■□□□□ 0.06
Hdac3O88895 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Gm10418-201ENSMUST00000100943 576 ntBASIC15.43■□□□□ 0.06
Hdac3O88895 Gm12896-201ENSMUST00000118430 226 ntBASIC15.43■□□□□ 0.06
Hdac3O88895 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Hdac3O88895 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
Hdac3O88895 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hdac3O88895 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hdac3O88895 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hdac3O88895 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hdac3O88895 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hdac3O88895 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hdac3O88895 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Hdac3O88895 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hdac3O88895 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Hdac3O88895 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.42■□□□□ 0.06
Hdac3O88895 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.42■□□□□ 0.06
Hdac3O88895 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hdac3O88895 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Hdac3O88895 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.42■□□□□ 0.06
Hdac3O88895 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hdac3O88895 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hdac3O88895 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hdac3O88895 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Hdac3O88895 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.42■□□□□ 0.06
Hdac3O88895 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Hdac3O88895 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hdac3O88895 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.41■□□□□ 0.06
Hdac3O88895 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Hdac3O88895 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.41■□□□□ 0.06
Hdac3O88895 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hdac3O88895 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hdac3O88895 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hdac3O88895 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.41■□□□□ 0.06
Hdac3O88895 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.41■□□□□ 0.06
Hdac3O88895 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hdac3O88895 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hdac3O88895 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hdac3O88895 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hdac3O88895 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.41■□□□□ 0.06
Hdac3O88895 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hdac3O88895 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hdac3O88895 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hdac3O88895 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hdac3O88895 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Hdac3O88895 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hdac3O88895 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hdac3O88895 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hdac3O88895 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.41■□□□□ 0.06
Hdac3O88895 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hdac3O88895 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hdac3O88895 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Hdac3O88895 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hdac3O88895 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hdac3O88895 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.4■□□□□ 0.06
Hdac3O88895 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hdac3O88895 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hdac3O88895 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.4■□□□□ 0.06
Hdac3O88895 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hdac3O88895 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hdac3O88895 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hdac3O88895 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hdac3O88895 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.4■□□□□ 0.06
Hdac3O88895 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hdac3O88895 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hdac3O88895 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac3O88895 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.39■□□□□ 0.05
Hdac3O88895 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac3O88895 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac3O88895 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Hdac3O88895 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.39■□□□□ 0.05
Hdac3O88895 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac3O88895 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac3O88895 Gm11249-201ENSMUST00000117071 859 ntBASIC15.39■□□□□ 0.05
Hdac3O88895 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Hdac3O88895 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.39■□□□□ 0.05
Hdac3O88895 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac3O88895 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms