Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh2d1aO88890 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.23□□□□□ -0.45
Sh2d1aO88890 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh2d1aO88890 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.23□□□□□ -0.45
Sh2d1aO88890 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh2d1aO88890 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh2d1aO88890 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh2d1aO88890 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh2d1aO88890 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sh2d1aO88890 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh2d1aO88890 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sh2d1aO88890 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh2d1aO88890 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh2d1aO88890 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.23□□□□□ -0.45
Sh2d1aO88890 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh2d1aO88890 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sh2d1aO88890 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sh2d1aO88890 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Sh2d1aO88890 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC12.22□□□□□ -0.45
Sh2d1aO88890 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.22□□□□□ -0.45
Sh2d1aO88890 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh2d1aO88890 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sh2d1aO88890 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sh2d1aO88890 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.21□□□□□ -0.45
Sh2d1aO88890 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sh2d1aO88890 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sh2d1aO88890 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sh2d1aO88890 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sh2d1aO88890 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sh2d1aO88890 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.21□□□□□ -0.45
Sh2d1aO88890 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.21□□□□□ -0.45
Sh2d1aO88890 Gm29257-201ENSMUST00000186115 639 ntBASIC12.21□□□□□ -0.45
Sh2d1aO88890 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.21□□□□□ -0.45
Sh2d1aO88890 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sh2d1aO88890 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sh2d1aO88890 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sh2d1aO88890 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sh2d1aO88890 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sh2d1aO88890 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sh2d1aO88890 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sh2d1aO88890 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sh2d1aO88890 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sh2d1aO88890 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.21□□□□□ -0.46
Sh2d1aO88890 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sh2d1aO88890 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Sh2d1aO88890 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.2□□□□□ -0.46
Sh2d1aO88890 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Gm27275-201ENSMUST00000184318 272 ntBASIC12.2□□□□□ -0.46
Sh2d1aO88890 Gm29791-202ENSMUST00000207888 369 ntBASIC12.2□□□□□ -0.46
Sh2d1aO88890 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms