Protein–RNA interactions for Protein: O88623

Usp2, Ubiquitin carboxyl-terminal hydrolase 2, mousemouse

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp2O88623 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp2O88623 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Usp2O88623 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp2O88623 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp2O88623 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp2O88623 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.56■□□□□ 0.4
Usp2O88623 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Usp2O88623 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Usp2O88623 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.56■□□□□ 0.4
Usp2O88623 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp2O88623 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.56■□□□□ 0.4
Usp2O88623 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.56■□□□□ 0.4
Usp2O88623 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp2O88623 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp2O88623 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Usp2O88623 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp2O88623 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp2O88623 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp2O88623 Gm22697-201ENSMUST00000175194 63 ntBASIC17.55■□□□□ 0.4
Usp2O88623 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.55■□□□□ 0.4
Usp2O88623 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp2O88623 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.55■□□□□ 0.4
Usp2O88623 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.55■□□□□ 0.4
Usp2O88623 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp2O88623 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp2O88623 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp2O88623 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp2O88623 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Usp2O88623 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp2O88623 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp2O88623 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp2O88623 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp2O88623 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp2O88623 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Usp2O88623 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.54■□□□□ 0.4
Usp2O88623 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.54■□□□□ 0.4
Usp2O88623 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp2O88623 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.54■□□□□ 0.4
Usp2O88623 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp2O88623 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Usp2O88623 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp2O88623 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.54■□□□□ 0.4
Usp2O88623 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp2O88623 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Usp2O88623 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp2O88623 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp2O88623 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp2O88623 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp2O88623 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Usp2O88623 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp2O88623 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Usp2O88623 Gm10013-201ENSMUST00000106074 672 ntBASIC17.53■□□□□ 0.4
Usp2O88623 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp2O88623 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
Usp2O88623 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp2O88623 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp2O88623 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp2O88623 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp2O88623 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp2O88623 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp2O88623 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp2O88623 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.53■□□□□ 0.4
Usp2O88623 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp2O88623 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp2O88623 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp2O88623 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp2O88623 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.52■□□□□ 0.4
Usp2O88623 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
Usp2O88623 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.52■□□□□ 0.4
Usp2O88623 Gm18101-201ENSMUST00000215769 548 ntBASIC17.52■□□□□ 0.4
Usp2O88623 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp2O88623 Gm10566-201ENSMUST00000086739 996 ntBASIC17.52■□□□□ 0.4
Usp2O88623 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp2O88623 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Usp2O88623 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp2O88623 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp2O88623 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp2O88623 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Usp2O88623 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp2O88623 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Usp2O88623 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Usp2O88623 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Usp2O88623 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp2O88623 Gm13474-201ENSMUST00000122466 815 ntBASIC17.51■□□□□ 0.39
Usp2O88623 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.51■□□□□ 0.39
Usp2O88623 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.51■□□□□ 0.39
Usp2O88623 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp2O88623 Gm23634-201ENSMUST00000175071 91 ntBASIC17.51■□□□□ 0.39
Usp2O88623 Gm7213-201ENSMUST00000215977 950 ntBASIC17.51■□□□□ 0.39
Usp2O88623 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Usp2O88623 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Usp2O88623 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp2O88623 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp2O88623 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp2O88623 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp2O88623 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp2O88623 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
Usp2O88623 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Usp2O88623 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp2O88623 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms