Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf17O88472 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf17O88472 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf17O88472 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf17O88472 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.01■□□□□ 0.15
Tnfrsf17O88472 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf17O88472 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.01■□□□□ 0.15
Tnfrsf17O88472 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf17O88472 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf17O88472 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf17O88472 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Tnfrsf17O88472 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf17O88472 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16■□□□□ 0.15
Tnfrsf17O88472 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf17O88472 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf17O88472 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf17O88472 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf17O88472 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf17O88472 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf17O88472 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Tnfrsf17O88472 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf17O88472 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16■□□□□ 0.15
Tnfrsf17O88472 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf17O88472 Gm12350-201ENSMUST00000121208 462 ntBASIC16■□□□□ 0.15
Tnfrsf17O88472 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf17O88472 Gm10576-201ENSMUST00000191927 825 ntBASIC16■□□□□ 0.15
Tnfrsf17O88472 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf17O88472 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf17O88472 Gm9194-201ENSMUST00000220749 1447 ntBASIC16■□□□□ 0.15
Tnfrsf17O88472 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Tnfrsf17O88472 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Tnfrsf17O88472 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf17O88472 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf17O88472 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf17O88472 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16■□□□□ 0.15
Tnfrsf17O88472 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf17O88472 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Tnfrsf17O88472 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.99■□□□□ 0.15
Tnfrsf17O88472 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf17O88472 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.99■□□□□ 0.15
Tnfrsf17O88472 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Tnfrsf17O88472 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Tnfrsf17O88472 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf17O88472 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Tnfrsf17O88472 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.99■□□□□ 0.15
Tnfrsf17O88472 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.99■□□□□ 0.15
Tnfrsf17O88472 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf17O88472 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf17O88472 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf17O88472 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf17O88472 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Tnfrsf17O88472 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf17O88472 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf17O88472 Gm23935-201ENSMUST00000102303 57 ntBASIC15.98■□□□□ 0.15
Tnfrsf17O88472 Gm24270-201ENSMUST00000102326 57 ntBASIC15.98■□□□□ 0.15
Tnfrsf17O88472 Gm24245-201ENSMUST00000157318 57 ntBASIC15.98■□□□□ 0.15
Tnfrsf17O88472 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf17O88472 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf17O88472 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.98■□□□□ 0.15
Tnfrsf17O88472 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf17O88472 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.98■□□□□ 0.15
Tnfrsf17O88472 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf17O88472 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf17O88472 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf17O88472 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf17O88472 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf17O88472 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Tnfrsf17O88472 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Tnfrsf17O88472 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf17O88472 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf17O88472 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tnfrsf17O88472 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnfrsf17O88472 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnfrsf17O88472 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnfrsf17O88472 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.97■□□□□ 0.15
Tnfrsf17O88472 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnfrsf17O88472 Gm2756-201ENSMUST00000195851 400 ntBASIC15.97■□□□□ 0.15
Tnfrsf17O88472 Gm29791-202ENSMUST00000207888 369 ntBASIC15.97■□□□□ 0.15
Tnfrsf17O88472 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnfrsf17O88472 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnfrsf17O88472 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tnfrsf17O88472 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tnfrsf17O88472 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tnfrsf17O88472 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnfrsf17O88472 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnfrsf17O88472 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.96■□□□□ 0.15
Tnfrsf17O88472 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.96■□□□□ 0.15
Tnfrsf17O88472 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tnfrsf17O88472 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.96■□□□□ 0.15
Tnfrsf17O88472 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.96■□□□□ 0.15
Tnfrsf17O88472 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Tnfrsf17O88472 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnfrsf17O88472 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Tnfrsf17O88472 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnfrsf17O88472 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Tnfrsf17O88472 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnfrsf17O88472 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnfrsf17O88472 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tnfrsf17O88472 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnfrsf17O88472 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms