Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Pdlim3O70209 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim3O70209 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim3O70209 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim3O70209 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim3O70209 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim3O70209 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim3O70209 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim3O70209 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pdlim3O70209 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim3O70209 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim3O70209 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Pdlim3O70209 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim3O70209 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.66■□□□□ 0.1
Pdlim3O70209 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim3O70209 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim3O70209 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.66■□□□□ 0.1
Pdlim3O70209 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim3O70209 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.66■□□□□ 0.1
Pdlim3O70209 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim3O70209 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim3O70209 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim3O70209 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pdlim3O70209 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pdlim3O70209 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.66■□□□□ 0.1
Pdlim3O70209 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim3O70209 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim3O70209 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim3O70209 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pdlim3O70209 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pdlim3O70209 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim3O70209 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.65■□□□□ 0.1
Pdlim3O70209 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim3O70209 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim3O70209 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
Pdlim3O70209 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim3O70209 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.65■□□□□ 0.1
Pdlim3O70209 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.65■□□□□ 0.1
Pdlim3O70209 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim3O70209 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pdlim3O70209 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim3O70209 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim3O70209 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim3O70209 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim3O70209 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pdlim3O70209 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim3O70209 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim3O70209 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pdlim3O70209 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Pdlim3O70209 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim3O70209 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pdlim3O70209 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim3O70209 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim3O70209 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim3O70209 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.64■□□□□ 0.09
Pdlim3O70209 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Pdlim3O70209 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim3O70209 Gm13216-201ENSMUST00000117145 591 ntBASIC15.64■□□□□ 0.09
Pdlim3O70209 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.64■□□□□ 0.09
Pdlim3O70209 AV356131-201ENSMUST00000206201 750 ntBASIC15.64■□□□□ 0.09
Pdlim3O70209 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.64■□□□□ 0.09
Pdlim3O70209 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Pdlim3O70209 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim3O70209 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim3O70209 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim3O70209 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim3O70209 Flg-201ENSMUST00000050758 1488 ntBASIC15.64■□□□□ 0.09
Pdlim3O70209 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim3O70209 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim3O70209 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim3O70209 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim3O70209 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim3O70209 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.63■□□□□ 0.09
Pdlim3O70209 Mir2861-201ENSMUST00000175539 82 ntBASIC15.63■□□□□ 0.09
Pdlim3O70209 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim3O70209 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
Pdlim3O70209 Gm44549-201ENSMUST00000208351 577 ntBASIC15.63■□□□□ 0.09
Pdlim3O70209 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pdlim3O70209 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pdlim3O70209 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim3O70209 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim3O70209 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim3O70209 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim3O70209 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim3O70209 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim3O70209 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim3O70209 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim3O70209 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim3O70209 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim3O70209 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim3O70209 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim3O70209 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim3O70209 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pdlim3O70209 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim3O70209 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pdlim3O70209 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim3O70209 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim3O70209 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim3O70209 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.62■□□□□ 0.09
Pdlim3O70209 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms