Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh5O55240 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh5O55240 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh5O55240 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.36■□□□□ 0.21
Rdh5O55240 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.36■□□□□ 0.21
Rdh5O55240 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rdh5O55240 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.36■□□□□ 0.21
Rdh5O55240 Mir6982-201ENSMUST00000184354 68 ntBASIC16.36■□□□□ 0.21
Rdh5O55240 Gm10517-202ENSMUST00000192970 758 ntBASIC16.36■□□□□ 0.21
Rdh5O55240 Gm4974-201ENSMUST00000209974 875 ntBASIC16.36■□□□□ 0.21
Rdh5O55240 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh5O55240 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh5O55240 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh5O55240 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh5O55240 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh5O55240 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.36■□□□□ 0.21
Rdh5O55240 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh5O55240 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh5O55240 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh5O55240 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh5O55240 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh5O55240 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh5O55240 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh5O55240 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.35■□□□□ 0.21
Rdh5O55240 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh5O55240 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.35■□□□□ 0.21
Rdh5O55240 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh5O55240 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh5O55240 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh5O55240 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh5O55240 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.35■□□□□ 0.21
Rdh5O55240 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Rdh5O55240 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.35■□□□□ 0.21
Rdh5O55240 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh5O55240 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh5O55240 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh5O55240 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh5O55240 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh5O55240 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh5O55240 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh5O55240 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh5O55240 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh5O55240 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh5O55240 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh5O55240 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh5O55240 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.34■□□□□ 0.21
Rdh5O55240 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.34■□□□□ 0.21
Rdh5O55240 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.34■□□□□ 0.21
Rdh5O55240 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh5O55240 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rdh5O55240 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rdh5O55240 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Rdh5O55240 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rdh5O55240 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rdh5O55240 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh5O55240 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.33■□□□□ 0.2
Rdh5O55240 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh5O55240 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rdh5O55240 Mir7071-201ENSMUST00000184847 69 ntBASIC16.33■□□□□ 0.2
Rdh5O55240 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.33■□□□□ 0.2
Rdh5O55240 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh5O55240 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh5O55240 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh5O55240 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh5O55240 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh5O55240 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.33■□□□□ 0.2
Rdh5O55240 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh5O55240 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh5O55240 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh5O55240 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh5O55240 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh5O55240 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Rdh5O55240 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh5O55240 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh5O55240 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh5O55240 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh5O55240 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Rdh5O55240 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh5O55240 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.32■□□□□ 0.2
Rdh5O55240 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.32■□□□□ 0.2
Rdh5O55240 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh5O55240 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh5O55240 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.32■□□□□ 0.2
Rdh5O55240 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh5O55240 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh5O55240 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.31■□□□□ 0.2
Rdh5O55240 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rdh5O55240 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh5O55240 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh5O55240 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh5O55240 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh5O55240 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rdh5O55240 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh5O55240 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh5O55240 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh5O55240 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh5O55240 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh5O55240 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.31■□□□□ 0.2
Rdh5O55240 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh5O55240 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms