Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trdmt1O55055 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trdmt1O55055 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Trdmt1O55055 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trdmt1O55055 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.02■□□□□ 0.64
Trdmt1O55055 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trdmt1O55055 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trdmt1O55055 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Trdmt1O55055 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trdmt1O55055 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trdmt1O55055 Gm24589-201ENSMUST00000116692 94 ntBASIC19.01■□□□□ 0.63
Trdmt1O55055 Gm15794-201ENSMUST00000120182 631 ntBASIC19.01■□□□□ 0.63
Trdmt1O55055 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trdmt1O55055 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trdmt1O55055 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.01■□□□□ 0.63
Trdmt1O55055 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trdmt1O55055 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trdmt1O55055 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trdmt1O55055 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trdmt1O55055 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trdmt1O55055 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trdmt1O55055 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trdmt1O55055 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trdmt1O55055 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trdmt1O55055 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trdmt1O55055 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trdmt1O55055 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Trdmt1O55055 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19■□□□□ 0.63
Trdmt1O55055 Gm27000-201ENSMUST00000182943 842 ntBASIC19■□□□□ 0.63
Trdmt1O55055 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19■□□□□ 0.63
Trdmt1O55055 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trdmt1O55055 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trdmt1O55055 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trdmt1O55055 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trdmt1O55055 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trdmt1O55055 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trdmt1O55055 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trdmt1O55055 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Trdmt1O55055 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.99■□□□□ 0.63
Trdmt1O55055 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Trdmt1O55055 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.99■□□□□ 0.63
Trdmt1O55055 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Trdmt1O55055 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trdmt1O55055 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Trdmt1O55055 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trdmt1O55055 Grk6-206ENSMUST00000224995 2971 ntBASIC18.99■□□□□ 0.63
Trdmt1O55055 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trdmt1O55055 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trdmt1O55055 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trdmt1O55055 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trdmt1O55055 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
Trdmt1O55055 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Trdmt1O55055 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.98■□□□□ 0.63
Trdmt1O55055 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Trdmt1O55055 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trdmt1O55055 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trdmt1O55055 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trdmt1O55055 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trdmt1O55055 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Trdmt1O55055 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trdmt1O55055 Gm11336-201ENSMUST00000118168 334 ntBASIC18.97■□□□□ 0.63
Trdmt1O55055 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trdmt1O55055 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.97■□□□□ 0.63
Trdmt1O55055 Gm34391-201ENSMUST00000203706 907 ntBASIC18.97■□□□□ 0.63
Trdmt1O55055 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.97■□□□□ 0.63
Trdmt1O55055 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Trdmt1O55055 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Trdmt1O55055 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trdmt1O55055 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trdmt1O55055 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trdmt1O55055 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trdmt1O55055 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trdmt1O55055 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trdmt1O55055 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trdmt1O55055 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trdmt1O55055 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trdmt1O55055 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trdmt1O55055 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trdmt1O55055 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trdmt1O55055 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trdmt1O55055 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trdmt1O55055 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trdmt1O55055 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.95■□□□□ 0.62
Trdmt1O55055 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trdmt1O55055 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trdmt1O55055 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Trdmt1O55055 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trdmt1O55055 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Trdmt1O55055 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trdmt1O55055 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trdmt1O55055 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trdmt1O55055 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trdmt1O55055 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trdmt1O55055 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trdmt1O55055 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trdmt1O55055 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trdmt1O55055 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Trdmt1O55055 Gm13186-201ENSMUST00000118031 316 ntBASIC18.94■□□□□ 0.62
Trdmt1O55055 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trdmt1O55055 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms